9CCA
Cryo-EM structure of a designed pyridoxal phosphate (PLP) synthase fused to a designed circumsporozoite protein antigen from Plasmodium falciparum (CSP-P1-CSP and CSP-P2-CSP)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Circumsporozoite protein,Pyridoxal 5'-phosphate synthase subunit Pdx1 | polymer | 537 | 58417.1 | 12 | UniProt (Q7K740) UniProt (C6KT50) Pfam (PF01680) Pfam (PF00090) | Plasmodium falciparum (malaria parasite P. falciparum) | |
| 2 | G, H, I, J, K... (G, H, I, J, K...) | Circumsporozoite protein,Pyridoxal 5'-phosphate synthase subunit PDX2 | polymer | 454 | 49843.6 | 12 | UniProt (Q7K740) UniProt (Q8IIK4) Pfam (PF01174) Pfam (PF00090) | Plasmodium falciparum (malaria parasite P. falciparum) |
Sequence modifications
A, B, C, D, E, F, M, N, O, P, Q, R: 4 - 17 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 419 - 432 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 18 - 37 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 433 - 452 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 38 - 111 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 453 - 526 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 117 - 416 (UniProt: C6KT50)
G, H, I, J, K, L, S, T, U, V, W, X: 4 - 17 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 336 - 349 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 18 - 37 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 350 - 369 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 38 - 111 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 370 - 443 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 117 - 333 (UniProt: Q8IIK4)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Thr 2 | - | cloning artifact |
| Gly 3 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Gly 112 | - | linker |
| Gly 113 | - | linker |
| Ser 114 | - | linker |
| Gly 115 | - | cloning artifact |
| Thr 116 | - | cloning artifact |
A, B, C, D, E, F, M, N, O, P, Q, R: 433 - 452 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 38 - 111 (UniProt: Q7K740)
A, B, C, D, E, F, M, N, O, P, Q, R: 453 - 526 (UniProt: Q7K740)
| PDB | External Database | Details |
|---|---|---|
| Gly 527 | - | linker |
| Gly 528 | - | linker |
| Ser 529 | - | linker |
| Leu 530 | - | cloning artifact |
| Glu 531 | - | cloning artifact |
| His 532 | - | expression tag |
| His 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
| His 536 | - | expression tag |
| His 537 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Arg 198 | Lys 83 | engineered mutation |
| Cys 289 | Lys 174 | engineered mutation |
| Cys 293 | Ser 178 | engineered mutation |
| Thr 417 | - | cloning artifact |
| Gly 418 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Thr 2 | - | cloning artifact |
| Gly 3 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Gly 112 | - | linker |
| Gly 113 | - | linker |
| Ser 114 | - | linker |
| Gly 115 | - | cloning artifact |
| Thr 116 | - | cloning artifact |
G, H, I, J, K, L, S, T, U, V, W, X: 350 - 369 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 38 - 111 (UniProt: Q7K740)
G, H, I, J, K, L, S, T, U, V, W, X: 370 - 443 (UniProt: Q7K740)
| PDB | External Database | Details |
|---|---|---|
| Gly 444 | - | linker |
| Gly 445 | - | linker |
| Ser 446 | - | linker |
| Leu 447 | - | cloning artifact |
| Glu 448 | - | cloning artifact |
| His 449 | - | expression tag |
| His 450 | - | expression tag |
| His 451 | - | expression tag |
| His 452 | - | expression tag |
| His 453 | - | expression tag |
| His 454 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gln 179 | Asn 65 | engineered mutation |
| Gln 242 | Asn 128 | engineered mutation |
| Asn 310 | His 196 | engineered mutation |
| Thr 334 | - | cloning artifact |
| Gly 335 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 1299128.1 | |
| All* | Total formula weight | 1299128.1 |






