9BVD
Crystal structure of SRY HMG box bound to DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (C, F, I) | Sex-determining region Y protein | polymer | 79 | 9940.7 | 3 | UniProt (Q05066) Pfam (PF00505) | Homo sapiens (human) | Testis-determining factor |
| 2 | B, E, H (A, D, G) | DNA (5'-D(*CP*AP*CP*TP*AP*GP*CP*AP*TP*TP*GP*TP*TP*TP*GP*GP*G)-3') | polymer | 17 | 5233.4 | 3 | synthetic construct | ||
| 3 | C, F, I (B, E, H) | DNA (5'-D(*GP*CP*CP*CP*AP*AP*AP*CP*AP*AP*TP*GP*CP*TP*AP*GP*TP*G)-3') | polymer | 18 | 5509.6 | 3 | synthetic construct | ||
| 4 | J, K (G) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 5 | L, M, N, O, P... (C, A, F, D, I...) | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence modifications
C, F, I: 4 - 81 (UniProt: Q05066)
| PDB | External Database | Details |
|---|---|---|
| Met 3 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 62051.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 124.1 | |
| All* | Total formula weight | 62175.2 |
