9BEW
Cryo-EM structure of the HIV-1 BG505 IDL Env trimer in complex with 3BNC117 and 10-1074 Fabs
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, G, M (G, A, M) | Envelope glycoprotein gp120 | polymer | 483 | 54120.3 | 3 | Pfam (PF00516) UniProt (by SIFTS) (Q2N0S6) | Human immunodeficiency virus 1 (HIV-1) | |
| 2 | B, H, N (B, E, N) | Envelope glycoprotein gp41 | polymer | 153 | 17114.4 | 3 | Pfam (PF00517) UniProt (by SIFTS) (Q2N0S6) | Human immunodeficiency virus 1 (HIV-1) | |
| 3 | C, I, O (C, F, O) | 3BNC117 heavy chain | polymer | 226 | 24656.5 | 3 | Homo sapiens (human) | ||
| 4 | D, J, P (D, I, P) | 3BNC117 light chain | polymer | 206 | 23022.7 | 3 | Homo sapiens (human) | ||
| 5 | E, K, Q (H, J, Q) | 10-1074 heavy chain | polymer | 235 | 25316.3 | 3 | Homo sapiens (human) | ||
| 6 | F, L, R (L, K, R) | 10-1074 light chain | polymer | 214 | 23180.8 | 3 | Homo sapiens (human) | ||
| 7 | AA, BA, CA, GA, IA... (a, b, c, g, i...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 12 | In PDB GlyTouCan (G42666HT) | |||
| 8 | DA, LA, V (d, l, V) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 3 | In PDB GlyTouCan (G56014GC) | |||
| 9 | EA, MA, W (e, m, W) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 3 | In PDB GlyTouCan (G22768VO) | |||
| 10 | FA, NA, X (f, n, X) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 3 | In PDB GlyTouCan (G22573RC) | |||
| 11 | HA, PA, Z (h, p, Z) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1559.4 | 3 | In PDB GlyTouCan (G68668TB) | |||
| 12 | AB, AC, BB, BC, CB... (B, N, D, P, A...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 39 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 18 |
| Total formula weight | 502232.9 | |
| Branched | Number of molecules | 24 |
| Total formula weight | 17968.4 | |
| Non-Polymers* | Number of molecules | 39 |
| Total formula weight | 8627.1 | |
| All* | Total formula weight | 528828.4 |
