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9B8S

Human polymerase epsilon bound to PCNA and DNA in the nucleotide exchange state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase epsilon catalytic subunit Apolymer2286261753.21UniProt (Q07864)
Pfam (PF03104)
Pfam (PF22634)
Pfam (PF08490)
Pfam (PF22912)
Homo sapiens (human)3'-5' exodeoxyribonuclease,DNA polymerase II subunit A
2B, C, D
(B, C, D)
Proliferating cell nuclear antigenpolymer26128795.83UniProt (P12004)
Pfam (PF00705)
Pfam (PF02747)
Homo sapiens (human)PCNA,Cyclin
3E
(P)
DNA (5'-D(P*GP*TP*GP*AP*TP*GP*CP*TP*TP*TP*AP*GP*AP*TP*TP*TP*TP*TP*C)-3')polymer3510824.01DNA molecule
4F
(T)
DNA (5'-D(P*AP*AP*AP*GP*TP*GP*AP*AP*AP*AP*AP*TP*CP*TP*AP*AP*AP*GP*CP*AP*TP*CP*AP*C)-3')polymer5918136.71DNA molecule
5G
(A)
IRON/SULFUR CLUSTERnon-polymer351.61Chemie (SF4)
Sequence modifications
A: 1 - 2286 (UniProt: Q07864)
PDBExternal DatabaseDetails
Ala 275Asp 275engineered mutation
Ala 277Glu 277engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight377101.1
Non-Polymers*Number of molecules1
Total formula weight351.6
All*Total formula weight377452.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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