9AYT
Structure of the quorum quenching lactonase GcL bound to N-hexanoyl-L-homoserine lactone
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (P, D) | GcL lactonase | polymer | 297 | 34378.9 | 2 | UniProt (A0A023DFE8) Pfam (PF00753) | Parageobacillus caldoxylosilyticus | |
| 2 | C, T (P, D) | COBALT (II) ION | non-polymer | 58.9 | 2 | Chemie (CO) | |||
| 3 | D, U (P, D) | FE (III) ION | non-polymer | 55.8 | 2 | Chemie (FE) | |||
| 4 | AA, BA, CA, DA, E... (D, P) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 18 | Chemie (EDO) | |||
| 5 | EA, FA, GA, HA, IA... (D, P) | ACETATE ION | non-polymer | 59.0 | 9 | Chemie (ACT) | |||
| 6 | KA, Q (D, P) | N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide | non-polymer | 199.2 | 2 | Chemie (HL6) | |||
| 7 | R (P) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 8 | LA, S (D, P) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 9 | MA, NA (P, D) | water | water | 18.0 | 214 | Chemie (HOH) |
Sequence modifications
P, D: 2 - 283 (UniProt: A0A023DFE8)
| PDB | External Database | Details |
|---|---|---|
| Trp -13 | - | expression tag |
| Ser -12 | - | expression tag |
| His -11 | - | expression tag |
| Pro -10 | - | expression tag |
| Gln -9 | - | expression tag |
| Phe -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Lys -6 | - | expression tag |
| Glu -5 | - | expression tag |
| Asn -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Tyr -2 | - | expression tag |
| Phe -1 | - | expression tag |
| Gln 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68757.8 | |
| Non-Polymers* | Number of molecules | 36 |
| Total formula weight | 2707.1 | |
| All* | Total formula weight | 71464.9 |
