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8YRK

Tubulin-Compound KY216: stathmin-like domain complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Detyrosinated tubulin alpha-1B chainpolymer45050041.32UniProt (Q2XVP4)
Pfam (PF00091)
Pfam (PF03953)
Sus scrofa (pig)
2B, D
(B, D)
Tubulin beta chainpolymer44549999.92UniProt (A0A8D1UIR5)
Pfam (PF00091)
Pfam (PF03953)
UniProt (by SIFTS) (A0A287AGU7)
Sus scrofa (pig)
3E
(E)
Stathmin-4polymer14316844.21UniProt (P63042)
Pfam (PF00836)
Mus musculus (mouse)Stathmin-like protein B3,RB3
4F
(F)
Tubulin tyrosine ligasepolymer38444378.51UniProt (A0A8V0Z8P0)
Pfam (PF03133)
Gallus gallus (chicken)
5G, Q
(A, C)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.22Chemie (GTP)
6H, L, T, V
(A, B, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
7I, R
(A, C)
CALCIUM IONnon-polymer40.12Chemie (CA)
8J
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
9K, U
(B, D)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.22Chemie (GDP)
10M, N
(B)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.22Chemie (MES)
11O
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
12P, W
(B, D)
(11R,16S)-11-(3,5-dichloro-4-methoxyphenyl)-4,7-dioxa-12,14-diazatetracyclo[8.7.0.03,8.012,16]heptadeca-1,3(8),9-triene-13,15-dionenon-polymer435.32Chemie (A1D62)
13S
(C)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
14X
(F)
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTERnon-polymer505.21Chemie (ACP)
15AA, BA, CA, Y, Z
(C, D, E, A, B)
waterwater18.033Chemie (HOH)
Sequence modifications
E: 5 - 145 (UniProt: P63042)
PDBExternal DatabaseDetails
Met 3-initiating methionine
Ala 4-expression tag
F: 1 - 378 (UniProt: A0A8V0Z8P0)
PDBExternal DatabaseDetails
-Ala 53deletion
-Glu 54deletion
-Met 55deletion
-Gln 56deletion
-Gln 57deletion
-Gln 58deletion
-Leu 59deletion
-Leu 60deletion
-Glu 61deletion
-Gly 62deletion
-Asp 63deletion
-Gln 64deletion
-Thr 65deletion
-Leu 66deletion
-Val 67deletion
-Leu 68deletion
-Ala 69deletion
-Ser 70deletion
-Ser 71deletion
-Thr 72deletion
-His 73deletion
-Pro 74deletion
-Glu 75deletion
-Ser 76deletion
-Val 77deletion
-Asp 78deletion
-Ser 79deletion
-Asp 80deletion
-Lys 81deletion
-Asn 82deletion
-His 83deletion
-Gly 84deletion
-Phe 85deletion
His 379-expression tag
His 380-expression tag
His 381-expression tag
His 382-expression tag
His 383-expression tag
His 384-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight261305.0
Non-Polymers*Number of molecules18
Total formula weight4065.9
All*Total formula weight265370.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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