8XUD
Crystal structure of adaptor NlpI in complex with endopeptidase MepS and PDZ-protease Prc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Lipoprotein NlpI | polymer | 297 | 34082.7 | 2 | UniProt (P0AFB1) In PDB | Escherichia coli K-12 | |
2 | C, D | Tail-specific protease | polymer | 688 | 77520.8 | 2 | UniProt (P23865) Pfam (PF17804) Pfam (PF00595) Pfam (PF03572) Pfam (PF11818) In PDB | Escherichia coli K-12 | C-terminal-processing peptidase,PRC protein,Protease Re |
3 | I, J, K, L | Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase | polymer | 168 | 19148.4 | 4 | UniProt (P0AFV4) Pfam (PF00877) In PDB | Escherichia coli K-12 | Lipoprotein Spr,Murein hydrolase MepS |
4 | M | Substrate peptide | polymer | 8 | 698.9 | 1 | Escherichia coli K-12 | ||
5 | N | Substrate peptide | polymer | 9 | 784.0 | 1 | Escherichia coli K-12 | ||
6 | I, J, K, L | PHOSPHATE ION | non-polymer | 95.0 | 14 | Chemie (PO4) |
Sequence modifications
A, B: 20 - 294 (UniProt: P0AFB1)
C, D: 1 - 682 (UniProt: P23865)
I, J, K, L: 2 - 162 (UniProt: P0AFV4)
PDB | External Database | Details |
---|---|---|
Met -2 | - | initiating methionine |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Ser 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
Ser 8 | - | expression tag |
Ser 9 | - | expression tag |
Gly 10 | - | expression tag |
Glu 11 | - | expression tag |
Asn 12 | - | expression tag |
Leu 13 | - | expression tag |
Tyr 14 | - | expression tag |
Phe 15 | - | expression tag |
Gln 16 | - | expression tag |
Gly 17 | - | expression tag |
His 18 | - | expression tag |
Met 19 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 452 | Ser 452 | engineered mutation |
Ala 477 | Lys 477 | engineered mutation |
His 683 | - | expression tag |
His 684 | - | expression tag |
His 685 | - | expression tag |
His 686 | - | expression tag |
His 687 | - | expression tag |
His 688 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 1 | - | initiating methionine |
His 163 | - | expression tag |
His 164 | - | expression tag |
His 165 | - | expression tag |
His 166 | - | expression tag |
His 167 | - | expression tag |
His 168 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 301283.2 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 1329.6 | |
All* | Total formula weight | 302612.8 |