8XLP
Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | a, A | Photosystem II protein D1 | polymer | 328 | 36342.3 | 2 | UniProt (A6MVT2) Pfam (PF00124) In PDB | Rhodomonas salina | PSII D1 protein,Photosystem II Q(B) protein |
2 | b, B | Photosystem II CP47 reaction center protein | polymer | 509 | 56331.1 | 2 | UniProt (A6MW31) Pfam (PF00421) In PDB | Rhodomonas salina | PSII 47 kDa protein,Protein CP-47 |
3 | c, C | Photosystem II CP43 reaction center protein | polymer | 487 | 53609.4 | 2 | UniProt (A6MVR2) Pfam (PF00421) In PDB | Rhodomonas salina | PSII 43 kDa protein,Protein CP-43 |
4 | d, D | Photosystem II D2 protein | polymer | 351 | 39220.8 | 2 | UniProt (A6MVR3) Pfam (PF00124) In PDB | Rhodomonas salina | PSII D2 protein,Photosystem Q(A) protein |
5 | e, E | Cytochrome b559 subunit alpha | polymer | 84 | 9503.7 | 2 | UniProt (A6MVV5) Pfam (PF00283) Pfam (PF00284) In PDB | Rhodomonas salina | PSII reaction center subunit V |
6 | f, F | Cytochrome b559 subunit beta | polymer | 42 | 4860.8 | 2 | UniProt (A6MVV4) Pfam (PF00283) In PDB | Rhodomonas salina | PSII reaction center subunit VI |
7 | h, H | Photosystem II reaction center protein H | polymer | 67 | 7429.8 | 2 | UniProt (A6MW35) Pfam (PF00737) In PDB | Rhodomonas salina | PSII-H |
8 | i, I | Photosystem II reaction center protein I | polymer | 38 | 4390.1 | 2 | UniProt (A6MVW0) Pfam (PF02532) In PDB | Rhodomonas salina | PSII-I,PSII 4.8 kDa protein |
9 | k, K | Photosystem II reaction center protein K | polymer | 45 | 5025.1 | 2 | UniProt (A6MVZ3) Pfam (PF02533) In PDB | Rhodomonas salina | PSII-K |
10 | l, L | Photosystem II reaction center protein L | polymer | 38 | 4363.1 | 2 | UniProt (A6MVV3) Pfam (PF02419) In PDB | Rhodomonas salina | PSII-L |
11 | m, M | Photosystem II protein M | polymer | 40 | 4300.0 | 2 | Rhodomonas salina | ||
12 | t, T | Photosystem II reaction center protein T | polymer | 32 | 3708.5 | 2 | UniProt (A6MW32) Pfam (PF01405) In PDB | Rhodomonas salina | PSII-T |
13 | w, W | Photosystem II protein W | polymer | 74 | 7864.9 | 2 | Rhodomonas salina | ||
14 | x, X | Photosystem II reaction center X protein | polymer | 39 | 4193.0 | 2 | UniProt (A6MVU5) Pfam (PF06596) In PDB | Rhodomonas salina | |
15 | y, Y | Photosystem II reaction center protein Psb30 | polymer | 34 | 3662.5 | 2 | UniProt (A6MVU9) Pfam (PF05969) In PDB | Rhodomonas salina | Photosystem II reaction center protein Ycf12 |
16 | z, Z | Photosystem II reaction center protein Z | polymer | 62 | 6656.1 | 2 | UniProt (A6MVZ2) Pfam (PF01737) In PDB | Rhodomonas salina | PSII-Z |
17 | g, G | NCP | polymer | 284 | 30760.9 | 2 | Rhodomonas salina | ||
18 | 2, O | CAC2 | polymer | 217 | 23912.7 | 2 | Rhodomonas salina | ||
19 | 3, P | CAC3 | polymer | 221 | 23723.5 | 2 | Rhodomonas salina | ||
20 | 4, Q | CAC4 | polymer | 216 | 23111.8 | 2 | Rhodomonas salina | ||
21 | 5, R | CAC5 | polymer | 229 | 24738.4 | 2 | Rhodomonas salina | ||
22 | 6, S | CAC6 | polymer | 227 | 24792.5 | 2 | Rhodomonas salina | ||
23 | 1, N | CAC1 | polymer | 233 | 25265.2 | 2 | Rhodomonas salina | ||
24 | A, a | FE (II) ION | non-polymer | 55.8 | 2 | Chemie (FE2) | |||
25 | d, D, 2, 4, G... | CHLOROPHYLL A | non-polymer | 893.5 | 194 | Chemie (CLA) | |||
26 | A, a, D, d | PHEOPHYTIN A | non-polymer | 871.2 | 4 | Chemie (PHO) | |||
27 | b, D, P, d, S... | 1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene | non-polymer | 536.9 | 24 | Chemie (WVN) | |||
28 | a, A | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 4 | Chemie (SQD) | |||
29 | A, a, D, d | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 4 | Chemie (PL9) | |||
30 | A, a | BICARBONATE ION | non-polymer | 61.0 | 2 | Chemie (BCT) | |||
31 | B, b, D, d, A... | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 20 | Chemie (LHG) | |||
32 | C, c, A, a | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
33 | A, a | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
34 | B, b, G, D, d... | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 22 | Chemie (LMG) | |||
35 | H, h, C, c | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 4 | Chemie (DGD) | |||
36 | E, e | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 2 | Chemie (HEM) | |||
37 | 5, 4, O, 1, R... | Chlorophyll c2 | non-polymer | 608.9 | 24 | Chemie (KC2) | |||
38 | P, 2, S, 5, O... | (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol | non-polymer | 564.8 | 48 | Chemie (II0) | |||
39 | 2, 5, O, R, 4... | (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol | non-polymer | 550.9 | 8 | Chemie (IHT) | |||
40 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 46 |
Total formula weight | 855532.3 | |
Non-Polymers* | Number of molecules | 370 |
Total formula weight | 279419.6 | |
All* | Total formula weight | 1134951.9 |