8XLP

Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, R (a, A)	Photosystem II protein D1	polymer	328	36342.3	2	UniProt (A6MVT2) Pfam (PF00124)	Rhodomonas salina	PSII D1 protein,Photosystem II Q(B) protein
2	B, S (b, B)	Photosystem II CP47 reaction center protein	polymer	509	56331.1	2	UniProt (A6MW31) Pfam (PF00421)	Rhodomonas salina	PSII 47 kDa protein,Protein CP-47
3	C, T (c, C)	Photosystem II CP43 reaction center protein	polymer	487	53609.4	2	UniProt (A6MVR2) Pfam (PF00421)	Rhodomonas salina	PSII 43 kDa protein,Protein CP-43
4	D, U (d, D)	Photosystem II D2 protein	polymer	351	39220.8	2	UniProt (A6MVR3) Pfam (PF00124)	Rhodomonas salina	PSII D2 protein,Photosystem Q(A) protein
5	E, V (e, E)	Cytochrome b559 subunit alpha	polymer	84	9503.7	2	UniProt (A6MVV5) Pfam (PF00283) Pfam (PF00284)	Rhodomonas salina	PSII reaction center subunit V
6	F, W (f, F)	Cytochrome b559 subunit beta	polymer	42	4860.8	2	UniProt (A6MVV4) Pfam (PF00283)	Rhodomonas salina	PSII reaction center subunit VI
7	G, X (h, H)	Photosystem II reaction center protein H	polymer	67	7429.8	2	UniProt (A6MW35) Pfam (PF00737)	Rhodomonas salina	PSII-H
8	H, Y (i, I)	Photosystem II reaction center protein I	polymer	38	4390.1	2	UniProt (A6MVW0) Pfam (PF02532)	Rhodomonas salina	PSII-I,PSII 4.8 kDa protein
9	I, Z (k, K)	Photosystem II reaction center protein K	polymer	45	5025.1	2	UniProt (A6MVZ3) Pfam (PF02533)	Rhodomonas salina	PSII-K
10	AA, J (l, L)	Photosystem II reaction center protein L	polymer	38	4363.1	2	UniProt (A6MVV3) Pfam (PF02419)	Rhodomonas salina	PSII-L
11	BA, K (m, M)	Photosystem II protein M	polymer	40	4300.0	2		Rhodomonas salina
12	CA, L (t, T)	Photosystem II reaction center protein T	polymer	32	3708.5	2	UniProt (A6MW32) Pfam (PF01405)	Rhodomonas salina	PSII-T
13	DA, M (w, W)	Photosystem II protein W	polymer	74	7864.9	2		Rhodomonas salina
14	EA, N (x, X)	Photosystem II reaction center X protein	polymer	39	4193.0	2	UniProt (A6MVU5) Pfam (PF06596)	Rhodomonas salina
15	FA, O (y, Y)	Photosystem II reaction center protein Psb30	polymer	34	3662.5	2	UniProt (A6MVU9) Pfam (PF05969)	Rhodomonas salina	Photosystem II reaction center protein Ycf12
16	GA, P (z, Z)	Photosystem II reaction center protein Z	polymer	62	6656.1	2	UniProt (A6MVZ2) Pfam (PF01737)	Rhodomonas salina	PSII-Z
17	MA, Q (g, G)	NCP	polymer	284	30760.9	2		Rhodomonas salina
18	HA, OA (2, O)	CAC2	polymer	217	23912.7	2		Rhodomonas salina
19	IA, PA (3, P)	CAC3	polymer	221	23723.5	2		Rhodomonas salina
20	JA, QA (4, Q)	CAC4	polymer	216	23111.8	2		Rhodomonas salina
21	KA, RA (5, R)	CAC5	polymer	229	24738.4	2		Rhodomonas salina
22	LA, SA (6, S)	CAC6	polymer	227	24792.5	2		Rhodomonas salina
23	NA, TA (1, N)	CAC1	polymer	233	25265.2	2		Rhodomonas salina
24	TD, UA (A, a)	FE (II) ION	non-polymer		55.8	2	Chemie (FE2)
25	AD, AG, AH, AI, AK... (d, D, 2, 4, G...)	CHLOROPHYLL A	non-polymer		893.5	194	Chemie (CLA)
26	WD, XA, XF, YC (A, a, D, d)	PHEOPHYTIN A	non-polymer		871.2	4	Chemie (PHO)
27	AC, EG, EM, FD, FO... (b, D, P, d, S...)	1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene	non-polymer		536.9	24	Chemie (WVN)
28	AB, BE, CB, ZD (a, A)	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	4	Chemie (SQD)
29	AE, BB, BG, CD (A, a, D, d)	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	4	Chemie (PL9)
30	CE, DB (A, a)	BICARBONATE ION	non-polymer		61.0	2	Chemie (BCT)
31	BF, CC, CG, DD, DE... (B, b, D, d, A...)	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	20	Chemie (LHG)
32	CF, DC, EE, FB (C, c, A, a)	CHLORIDE ION	non-polymer		35.5	4	Chemie (CL)
33	FE, GB, GE, HB (A, a)	MANGANESE (II) ION	non-polymer		54.9	4	Chemie (MN)
34	AF, BC, CK, DG, ED... (B, b, G, D, d...)	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	22	Chemie (LMG)
35	IG, JD, TF, UC (H, h, C, c)	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	4	Chemie (DGD)
36	FG, GD (E, e)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	2	Chemie (HEM)
37	AJ, CI, FL, HI, HK... (5, 4, O, 1, R...)	Chlorophyll c2	non-polymer		608.9	24	Chemie (KC2)
38	AM, BH, BM, BO, CH... (P, 2, S, 5, O...)	(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol	non-polymer		564.8	48	Chemie (II0)
39	FH, HJ, ML, ON, PI... (2, 5, O, R, 4...)	(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol	non-polymer		550.9	8	Chemie (IHT)
40	AP, BP (c, C)	water	water		18.0	2	Chemie (HOH)

Contents of the asymmetric unit

Polymers	Number of chains	46
	Total formula weight	855532.3
Non-Polymers*	Number of molecules	370
	Total formula weight	279419.6
All*	Total formula weight	1134951.9

*Water molecules are not included.