8XLP

Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina

Functional Information from GO Data

Chain	GOid	namespace	contents
a	0005506	molecular_function	iron ion binding
a	0009055	molecular_function	electron transfer activity
a	0009507	cellular_component	chloroplast
a	0009523	cellular_component	photosystem II
a	0009535	cellular_component	chloroplast thylakoid membrane
a	0009579	cellular_component	thylakoid
a	0009635	biological_process	response to herbicide
a	0015979	biological_process	photosynthesis
a	0016020	cellular_component	membrane
a	0016168	molecular_function	chlorophyll binding
a	0016491	molecular_function	oxidoreductase activity
a	0016682	molecular_function	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
a	0046872	molecular_function	metal ion binding
A	0005506	molecular_function	iron ion binding
A	0009055	molecular_function	electron transfer activity
A	0009507	cellular_component	chloroplast
A	0009523	cellular_component	photosystem II
A	0009535	cellular_component	chloroplast thylakoid membrane
A	0009579	cellular_component	thylakoid
A	0009635	biological_process	response to herbicide
A	0015979	biological_process	photosynthesis
A	0016020	cellular_component	membrane
A	0016168	molecular_function	chlorophyll binding
A	0016491	molecular_function	oxidoreductase activity
A	0016682	molecular_function	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
A	0046872	molecular_function	metal ion binding
b	0009507	cellular_component	chloroplast
b	0009523	cellular_component	photosystem II
b	0009535	cellular_component	chloroplast thylakoid membrane
b	0009579	cellular_component	thylakoid
b	0015979	biological_process	photosynthesis
b	0016020	cellular_component	membrane
b	0016168	molecular_function	chlorophyll binding
B	0009507	cellular_component	chloroplast
B	0009523	cellular_component	photosystem II
B	0009535	cellular_component	chloroplast thylakoid membrane
B	0009579	cellular_component	thylakoid
B	0015979	biological_process	photosynthesis
B	0016020	cellular_component	membrane
B	0016168	molecular_function	chlorophyll binding
d	0005506	molecular_function	iron ion binding
d	0009055	molecular_function	electron transfer activity
d	0009507	cellular_component	chloroplast
d	0009523	cellular_component	photosystem II
d	0009535	cellular_component	chloroplast thylakoid membrane
d	0009579	cellular_component	thylakoid
d	0015979	biological_process	photosynthesis
d	0016020	cellular_component	membrane
d	0016168	molecular_function	chlorophyll binding
d	0016491	molecular_function	oxidoreductase activity
d	0046872	molecular_function	metal ion binding
D	0005506	molecular_function	iron ion binding
D	0009055	molecular_function	electron transfer activity
D	0009507	cellular_component	chloroplast
D	0009523	cellular_component	photosystem II
D	0009535	cellular_component	chloroplast thylakoid membrane
D	0009579	cellular_component	thylakoid
D	0015979	biological_process	photosynthesis
D	0016020	cellular_component	membrane
D	0016168	molecular_function	chlorophyll binding
D	0016491	molecular_function	oxidoreductase activity
D	0046872	molecular_function	metal ion binding
e	0005506	molecular_function	iron ion binding
e	0009055	molecular_function	electron transfer activity
e	0009507	cellular_component	chloroplast
e	0009523	cellular_component	photosystem II
e	0009535	cellular_component	chloroplast thylakoid membrane
e	0009536	cellular_component	plastid
e	0009579	cellular_component	thylakoid
e	0015979	biological_process	photosynthesis
e	0016020	cellular_component	membrane
e	0046872	molecular_function	metal ion binding
E	0005506	molecular_function	iron ion binding
E	0009055	molecular_function	electron transfer activity
E	0009507	cellular_component	chloroplast
E	0009523	cellular_component	photosystem II
E	0009535	cellular_component	chloroplast thylakoid membrane
E	0009536	cellular_component	plastid
E	0009579	cellular_component	thylakoid
E	0015979	biological_process	photosynthesis
E	0016020	cellular_component	membrane
E	0046872	molecular_function	metal ion binding
f	0005506	molecular_function	iron ion binding
f	0009055	molecular_function	electron transfer activity
f	0009507	cellular_component	chloroplast
f	0009523	cellular_component	photosystem II
f	0009535	cellular_component	chloroplast thylakoid membrane
f	0009536	cellular_component	plastid
f	0009579	cellular_component	thylakoid
f	0015979	biological_process	photosynthesis
f	0016020	cellular_component	membrane
f	0046872	molecular_function	metal ion binding
F	0005506	molecular_function	iron ion binding
F	0009055	molecular_function	electron transfer activity
F	0009507	cellular_component	chloroplast
F	0009523	cellular_component	photosystem II
F	0009535	cellular_component	chloroplast thylakoid membrane
F	0009536	cellular_component	plastid
F	0009579	cellular_component	thylakoid
F	0015979	biological_process	photosynthesis
F	0016020	cellular_component	membrane
F	0046872	molecular_function	metal ion binding
h	0009507	cellular_component	chloroplast
h	0009523	cellular_component	photosystem II
h	0009535	cellular_component	chloroplast thylakoid membrane
h	0009579	cellular_component	thylakoid
h	0015979	biological_process	photosynthesis
h	0016020	cellular_component	membrane
H	0009507	cellular_component	chloroplast
H	0009523	cellular_component	photosystem II
H	0009535	cellular_component	chloroplast thylakoid membrane
H	0009579	cellular_component	thylakoid
H	0015979	biological_process	photosynthesis
H	0016020	cellular_component	membrane
i	0005737	cellular_component	cytoplasm
i	0009507	cellular_component	chloroplast
i	0009523	cellular_component	photosystem II
i	0009535	cellular_component	chloroplast thylakoid membrane
i	0009579	cellular_component	thylakoid
i	0015979	biological_process	photosynthesis
i	0016020	cellular_component	membrane
I	0005737	cellular_component	cytoplasm
I	0009507	cellular_component	chloroplast
I	0009523	cellular_component	photosystem II
I	0009535	cellular_component	chloroplast thylakoid membrane
I	0009579	cellular_component	thylakoid
I	0015979	biological_process	photosynthesis
I	0016020	cellular_component	membrane
k	0005737	cellular_component	cytoplasm
k	0009507	cellular_component	chloroplast
k	0009523	cellular_component	photosystem II
k	0009535	cellular_component	chloroplast thylakoid membrane
k	0009579	cellular_component	thylakoid
k	0015979	biological_process	photosynthesis
k	0016020	cellular_component	membrane
K	0005737	cellular_component	cytoplasm
K	0009507	cellular_component	chloroplast
K	0009523	cellular_component	photosystem II
K	0009535	cellular_component	chloroplast thylakoid membrane
K	0009579	cellular_component	thylakoid
K	0015979	biological_process	photosynthesis
K	0016020	cellular_component	membrane
l	0005737	cellular_component	cytoplasm
l	0009507	cellular_component	chloroplast
l	0009523	cellular_component	photosystem II
l	0009535	cellular_component	chloroplast thylakoid membrane
l	0009579	cellular_component	thylakoid
l	0015979	biological_process	photosynthesis
l	0016020	cellular_component	membrane
L	0005737	cellular_component	cytoplasm
L	0009507	cellular_component	chloroplast
L	0009523	cellular_component	photosystem II
L	0009535	cellular_component	chloroplast thylakoid membrane
L	0009579	cellular_component	thylakoid
L	0015979	biological_process	photosynthesis
L	0016020	cellular_component	membrane
t	0005737	cellular_component	cytoplasm
t	0009507	cellular_component	chloroplast
t	0009523	cellular_component	photosystem II
t	0009535	cellular_component	chloroplast thylakoid membrane
t	0009579	cellular_component	thylakoid
t	0015979	biological_process	photosynthesis
t	0016020	cellular_component	membrane
T	0005737	cellular_component	cytoplasm
T	0009507	cellular_component	chloroplast
T	0009523	cellular_component	photosystem II
T	0009535	cellular_component	chloroplast thylakoid membrane
T	0009579	cellular_component	thylakoid
T	0015979	biological_process	photosynthesis
T	0016020	cellular_component	membrane
x	0009507	cellular_component	chloroplast
x	0009523	cellular_component	photosystem II
x	0009535	cellular_component	chloroplast thylakoid membrane
x	0009579	cellular_component	thylakoid
x	0015979	biological_process	photosynthesis
x	0016020	cellular_component	membrane
X	0009507	cellular_component	chloroplast
X	0009523	cellular_component	photosystem II
X	0009535	cellular_component	chloroplast thylakoid membrane
X	0009579	cellular_component	thylakoid
X	0015979	biological_process	photosynthesis
X	0016020	cellular_component	membrane
y	0009507	cellular_component	chloroplast
y	0009523	cellular_component	photosystem II
y	0009535	cellular_component	chloroplast thylakoid membrane
y	0009579	cellular_component	thylakoid
y	0015979	biological_process	photosynthesis
y	0016020	cellular_component	membrane
Y	0009507	cellular_component	chloroplast
Y	0009523	cellular_component	photosystem II
Y	0009535	cellular_component	chloroplast thylakoid membrane
Y	0009579	cellular_component	thylakoid
Y	0015979	biological_process	photosynthesis
Y	0016020	cellular_component	membrane

Functional Information from PROSITE/UniProt

site_id	PS00244
Number of Residues	27
Details	REACTION_CENTER Photosynthetic reaction center proteins signature. NftlnPfHmmGvagilgaallcAiHGA

Chain	Residue	Details
d	ASN189-ALA215
a	ASN191-SER217

---

site_id	PS00537
Number of Residues	15
Details	CYTOCHROME_B559 Cytochrome b559 subunits heme-binding site signature. IfTFRWlaIHGLAVP

Chain	Residue	Details
f	ILE12-PRO26
e	ILE15-PRO29

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	40
Details	TRANSMEM: Helical => ECO:0000255|HAMAP-Rule:MF_01329

Chain	Residue	Details
y	VAL7-ILE27
A	PHE274-LEU288
Y	VAL7-ILE27
a	TRP142-ALA156
a	PHE197-LEU218
a	PHE274-LEU288
A	TYR29-THR46
A	HIS118-PHE133
A	TRP142-ALA156
A	PHE197-LEU218

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	BINDING: axial binding residue => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
a	HIS118
a	HIS198
A	HIS118
A	HIS198

---

site_id	SWS_FT_FI3
Number of Residues	16
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
a	TRP126
A	ASP170
A	GLU189
A	HIS215
A	SER264
A	HIS272
A	HIS332
A	GLU333
a	ASP170
a	GLU189
a	HIS215
a	SER264
a	HIS272
a	HIS332
a	GLU333
A	TRP126

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	SITE: Tyrosine radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
a	TYR161
A	TYR161

---

site_id	SWS_FT_FI5
Number of Residues	2
Details	SITE: Stabilizes free radical intermediate => ECO:0000255|HAMAP-Rule:MF_01379

Chain	Residue	Details
a	HIS190
A	HIS190

---