8XJV

Structural basis for the linker histone H5-nucleosome binding and chromatin compaction

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (Au)	DNA	polymer	2124	651873.8	1		synthetic construct
2	B (Av)	DNA	polymer	2124	660629.7	1		synthetic construct
3	AC, BC, C, CC, D... (A, B, C, D, E...)	Histone H2A	polymer	130	14109.4	24	UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211)	Xenopus laevis (African clawed frog)
4	FD, HC, IC, JC, KC... (J, M, N, O, P...)	Histone H2B 1.1	polymer	123	13641.9	24	UniProt (P02281) Pfam (PF00125)	Xenopus laevis (African clawed frog)	H2B1.1
5	AA, BA, CA, DA, EA... (X, Y, Z, a, b...)	Histone H3	polymer	136	15435.1	24	UniProt (A0A310TTQ1) Pfam (PF00125)	Xenopus laevis (African clawed frog)
6	AB, BB, CB, DB, EB... (v, w, x, y, z...)	Histone H4	polymer	103	11394.4	24	UniProt (P62799) Pfam (PF15511)	Xenopus laevis (African clawed frog)
7	AD, BD, CD, DD, ED... (Ah, Ai, Aj, Ak, Al...)	Histone H5	polymer	196	21631.9	12	UniProt (P02259) Pfam (PF00538)	Gallus gallus (chicken)

Sequence modifications

J, M, N, O, P, Q, R, S, T, U, V, W, av, aw, ax, ay, az, Aa, Ab, Ac, Ad, Af, Ag, At: 1949 - 2070 (UniProt: P02281)

PDB	External Database	Details
Met 1948	-	initiating methionine

Ah, Ai, Aj, Ak, Al, Am, An, Ao, Ap, Aq, Ar, As: 351 - 540 (UniProt: P02259)

PDB	External Database	Details
His 541	-	expression tag
His 542	-	expression tag
His 543	-	expression tag
His 544	-	expression tag
His 545	-	expression tag
His 546	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	110
	Total formula weight	2882027.8
All*	Total formula weight	2882027.8

*Water molecules are not included.