8XI2
Cryo-EM structure of the Chlamydomonas C* complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | MPN domain-containing protein | polymer | 2398 | 278543.4 | 1 | UniProt (A0A2K3E5Q8) Pfam (PF08082) Pfam (PF08083) Pfam (PF10598) Pfam (PF10597) Pfam (PF10596) Pfam (PF12134) Pfam (PF01398) Pfam (PF08084) | Chlamydomonas reinhardtii | |
| 2 | B (B) | U5 snRNA | polymer | 111 | 35370.8 | 1 | Chlamydomonas reinhardtii | ||
| 3 | C (C) | Elongation factor Tu, chloroplastic | polymer | 989 | 109366.8 | 1 | UniProt (A8JCA8) Pfam (PF00009) Pfam (PF03144) Pfam (PF03764) Pfam (PF00679) Pfam (PF16004) | Chlamydomonas reinhardtii | Snu114 |
| 4 | D (E) | U5-40K | polymer | 362 | 39437.4 | 1 | UniProt (A0A2K3DMA3) Pfam (PF00400) | Chlamydomonas reinhardtii | |
| 5 | E (F) | U6 snRNA | polymer | 101 | 32760.4 | 1 | Chlamydomonas reinhardtii | ||
| 6 | F, G, H, I (q, r, s, t) | Pre-mRNA-processing factor 19 | polymer | 503 | 54015.8 | 4 | UniProt (A8I9S6) Pfam (PF08606) Pfam (PF24814) | Chlamydomonas reinhardtii | |
| 7 | J (a) | Small nuclear ribonucleoprotein Sm D3 | polymer | 127 | 13789.2 | 1 | UniProt (A8I0E2) Pfam (PF01423) | Chlamydomonas reinhardtii | Sm-D3,snRNP core protein D3 |
| 8 | K (g) | Small nuclear ribonucleoprotein G | polymer | 77 | 8533.0 | 1 | UniProt (A8HRS8) Pfam (PF01423) | Chlamydomonas reinhardtii | snRNP-G |
| 9 | L (e) | Small nuclear ribonucleoprotein E | polymer | 87 | 10216.1 | 1 | UniProt (A8IYZ2) Pfam (PF01423) | Chlamydomonas reinhardtii | snRNP-E,Sm protein E |
| 10 | M (f) | Sm protein F | polymer | 85 | 9644.1 | 1 | UniProt (A8J834) Pfam (PF01423) | Chlamydomonas reinhardtii | |
| 11 | N (d) | Small nuclear ribonucleoprotein Sm D2 | polymer | 110 | 12630.7 | 1 | UniProt (A8I074) Pfam (PF01423) | Chlamydomonas reinhardtii | Sm-D2,snRNP core protein D2 |
| 12 | O (c) | Small nuclear ribonucleoprotein Sm D1 | polymer | 114 | 12668.9 | 1 | UniProt (A0A2K3CTT9) Pfam (PF01423) | Chlamydomonas reinhardtii | snRNP core protein D1 |
| 13 | P (b) | Sm domain-containing protein | polymer | 265 | 27745.2 | 1 | UniProt (A0A2K3CX88) Pfam (PF01423) | Chlamydomonas reinhardtii | |
| 14 | Q (I) | Syf1 | polymer | 925 | 104377.6 | 1 | UniProt (A0A2K3D3K4) Pfam (PF23233) Pfam (PF23220) Pfam (PF23231) | Chlamydomonas reinhardtii | |
| 15 | R (J) | Crooked neck protein | polymer | 835 | 96708.7 | 1 | UniProt (A0A2K3CXZ4) Pfam (PF23233) Pfam (PF23231) | Chlamydomonas reinhardtii | |
| 16 | S (P) | Cwf15/Cwc15 cell cycle control protein | polymer | 235 | 26422.3 | 1 | UniProt (A0A2K3CN43) Pfam (PF04889) | Chlamydomonas reinhardtii | |
| 17 | T (M) | PPIase cyclophilin-type domain-containing protein | polymer | 563 | 61094.6 | 1 | UniProt (A0A2K3E769) Pfam (PF00160) Pfam (PF08231) | Chlamydomonas reinhardtii | |
| 18 | U (T) | PLRG1 | polymer | 518 | 56100.5 | 1 | UniProt (A0A2K3DAW8) Pfam (PF00400) | Chlamydomonas reinhardtii | |
| 19 | V (O) | Rbm22 | polymer | 417 | 44413.2 | 1 | UniProt (A0A2K3E050) Pfam (PF21369) Pfam (PF16131) Pfam (PF00076) | Chlamydomonas reinhardtii | |
| 20 | W (N) | G10 protein | polymer | 233 | 26355.9 | 1 | UniProt (A0A2K3DAL7) Pfam (PF01125) | Chlamydomonas reinhardtii | Bud31 |
| 21 | X (R) | SKI-interacting protein SKIP SNW domain-containing protein | polymer | 684 | 73924.8 | 1 | UniProt (A0A2K3E831) Pfam (PF02731) | Chlamydomonas reinhardtii | |
| 22 | Y (H) | U2 snRNA | polymer | 192 | 61386.1 | 1 | GenBank (2826764) | Chlamydomonas reinhardtii | |
| 23 | Z (S) | Peptidyl-prolyl cis-trans isomerase | polymer | 157 | 17309.7 | 1 | UniProt (A8JGI0) Pfam (PF00160) | Chlamydomonas reinhardtii | PPIase |
| 24 | AA (W) | Prp17 | polymer | 576 | 63995.9 | 1 | UniProt (A0A2K3DUN6) Pfam (PF00400) | Chlamydomonas reinhardtii | |
| 25 | BA (L) | Cdc5L | polymer | 833 | 91838.6 | 1 | UniProt (A0A2K3DYR4) Pfam (PF13921) Pfam (PF11831) | Chlamydomonas reinhardtii | |
| 26 | CA (K) | Pre-mRNA-splicing factor SPF27 | polymer | 303 | 32563.0 | 1 | UniProt (A0A2K3CNP4) Pfam (PF05700) | Chlamydomonas reinhardtii | |
| 27 | DA (U) | CWF21 domain-containing protein | polymer | 721 | 80630.3 | 1 | UniProt (A0A2K3DFH0) | Chlamydomonas reinhardtii | |
| 28 | EA (V) | MI domain-containing protein | polymer | 928 | 102389.4 | 1 | UniProt (A0A2K3DML4) Pfam (PF02854) Pfam (PF02847) | Chlamydomonas reinhardtii | Cwc22 |
| 29 | FA (Q) | Intron-binding protein aquarius | polymer | 1844 | 201451.0 | 1 | UniProt (A0A2K3DR41) Pfam (PF16399) Pfam (PF21143) Pfam (PF21144) Pfam (PF13086) Pfam (PF13087) | Chlamydomonas reinhardtii | |
| 30 | GA (5) | RNA (5'-R(P*CP*CP*GP*AP*AP*CP*G)-3') | polymer | 7 | 2219.4 | 1 | Chlamydomonas reinhardtii | ||
| 31 | HA (3) | RNA (173-mer) | polymer | 173 | 55292.4 | 1 | Chlamydomonas reinhardtii | ||
| 32 | IA (C) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (GTP) | |||
| 33 | JA, KA, LA, MA, NA... (C, F) | MAGNESIUM ION | non-polymer | 24.3 | 7 | Chemie (MG) | |||
| 34 | QA, RA, SA (O, N) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 34 |
| Total formula weight | 2005242.5 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 889.5 | |
| All* | Total formula weight | 2006132.1 |
