8XBS
C. elegans apo-SID1 structure
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Systemic RNA interference defective protein 1 | polymer | 792 | 90081.7 | 2 | UniProt (Q9GZC8) In PDB | Caenorhabditis elegans | Systemic RNAi enabling protein |
2 | C, D, E, F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
3 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | A, B | CHOLESTEROL | non-polymer | 386.7 | 8 | Chemie (CLR) | |||
5 | A, B | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate | non-polymer | 760.1 | 2 | Chemie (POV) | |||
6 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
A, B: 18 - 776 (UniProt: Q9GZC8)
PDB | External Database | Details |
---|---|---|
Met -15 | - | initiating methionine |
Ile -14 | - | expression tag |
Arg -13 | - | expression tag |
Val -12 | - | expression tag |
Tyr -11 | - | expression tag |
Leu -10 | - | expression tag |
Ile -9 | - | expression tag |
Ile -8 | - | expression tag |
Leu -7 | - | expression tag |
Met -6 | - | expression tag |
His -5 | - | expression tag |
Leu -4 | - | expression tag |
Val -3 | - | expression tag |
Ile -2 | - | expression tag |
Gly -1 | - | expression tag |
Leu 0 | - | expression tag |
Thr 1 | - | expression tag |
His 2 | - | expression tag |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
Val 8 | - | expression tag |
Glu 9 | - | expression tag |
Asp 10 | - | expression tag |
Tyr 11 | - | expression tag |
Lys 12 | - | expression tag |
Asp 13 | - | expression tag |
Asp 14 | - | expression tag |
Asp 15 | - | expression tag |
Asp 16 | - | expression tag |
Lys 17 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 180163.3 | |
Branched | Number of molecules | 4 |
Total formula weight | 1697.6 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 5186.6 | |
All* | Total formula weight | 187047.5 |