Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8X46

Crystal structure of DIMT1 in complex with adenosylornithine (SFG) from Pyrococcus horikoshii

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BProbable ribosomal RNA small subunit methyltransferase Apolymer29033365.12UniProt (O59487)
Pfam (PF00398)
In PDB
Pyrococcus horikoshii OT3
2A, BSINEFUNGINnon-polymer381.42Chemie (SFG)
3A, BZINC IONnon-polymer65.46Chemie (ZN)
4A, BCHLORIDE IONnon-polymer35.52Chemie (CL)
5A, BDI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
6A, BARGININEnon-polymer175.22Chemie (ARG)
7BSULFITE IONnon-polymer80.11Chemie (SO3)
8B1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
9waterwater18.0235Chemie (HOH)
Sequence modifications
A, B: 23 - 290 (UniProt: O59487)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ser 2-expression tag
Ser 3-expression tag
Arg 4-expression tag
Ile 5-expression tag
Arg 6-expression tag
Ile 7-expression tag
Asn 8-expression tag
Thr 9-expression tag
Lys 10-expression tag
Ser 11-expression tag
Leu 12-expression tag
Leu 13-expression tag
Val 14-expression tag
Gln 15-expression tag
Pro 16-expression tag
Gly 17-expression tag
Tyr 18-expression tag
Ser 19-expression tag
Gly 20-expression tag
Ser 21-expression tag
Lys 22-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight66730.2
Non-Polymers*Number of molecules16
Total formula weight1930.9
All*Total formula weight68661.2
*Water molecules are not included.

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon