8WFS
Cryo-EM structure of GPIb-IX Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, D, E (c, C, B, b) | Platelet glycoprotein Ib beta chain | polymer | 192 | 20525.9 | 4 | UniProt (P13224) | Homo sapiens (human) | |
| 2 | C, F (E, X) | Platelet glycoprotein IX | polymer | 191 | 20346.1 | 2 | UniProt (P14770) Pfam (PF01462) Pfam (PF13855) | Homo sapiens (human) | |
| 3 | G (a) | Platelet glycoprotein Ib alpha chain | polymer | 140 | 15587.0 | 1 | UniProt (P07359) | Homo sapiens (human) | |
| 4 | H, I, L, M (A, D, H, I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 5 | J, K (F, G) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) |
Sequence modifications
c, C, B, b: 1 - 181 (UniProt: P13224)
E, X: 1 - 161 (UniProt: P14770)
a: 481 - 610 (UniProt: P07359)
| PDB | External Database | Details |
|---|---|---|
| Ser 148 | Cys 173 | engineered mutation |
| Gly 182 | - | expression tag |
| Ser 183 | - | expression tag |
| Gly 184 | - | expression tag |
| Asp 185 | - | expression tag |
| Tyr 186 | - | expression tag |
| Lys 187 | - | expression tag |
| Asp 188 | - | expression tag |
| Asp 189 | - | expression tag |
| Asp 190 | - | expression tag |
| Asp 191 | - | expression tag |
| Lys 192 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 154 | Cys 170 | engineered mutation |
| Ser 162 | - | expression tag |
| Ala 163 | - | expression tag |
| Trp 164 | - | expression tag |
| Ser 165 | - | expression tag |
| His 166 | - | expression tag |
| Pro 167 | - | expression tag |
| Gln 168 | - | expression tag |
| Phe 169 | - | expression tag |
| Glu 170 | - | expression tag |
| Lys 171 | - | expression tag |
| Gly 172 | - | expression tag |
| Gly 173 | - | expression tag |
| Gly 174 | - | expression tag |
| Ser 175 | - | expression tag |
| Gly 176 | - | expression tag |
| Gly 177 | - | expression tag |
| Gly 178 | - | expression tag |
| Ser 179 | - | expression tag |
| Gly 180 | - | expression tag |
| Gly 181 | - | expression tag |
| Ser 182 | - | expression tag |
| Ala 183 | - | expression tag |
| Trp 184 | - | expression tag |
| Ser 185 | - | expression tag |
| His 186 | - | expression tag |
| Pro 187 | - | expression tag |
| Gln 188 | - | expression tag |
| Phe 189 | - | expression tag |
| Glu 190 | - | expression tag |
| Lys 191 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Glu 559 | Ser 601 | engineered mutation |
| Glu 609 | Ser 651 | engineered mutation |
| Gly 611 | - | expression tag |
| Gly 612 | - | expression tag |
| His 613 | - | expression tag |
| His 614 | - | expression tag |
| His 615 | - | expression tag |
| His 616 | - | expression tag |
| His 617 | - | expression tag |
| His 618 | - | expression tag |
| His 619 | - | expression tag |
| His 620 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 138382.9 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 2870.7 | |
| All* | Total formula weight | 141253.6 |






