8WEJ
Structure of human phagocyte NADPH oxidase in the activated state
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Cytochrome b-245 light chain | polymer | 195 | 21005.4 | 1 | UniProt (P13498) Pfam (PF05038) In PDB | Homo sapiens (human) | |
2 | B | Cytochrome b-245 heavy chain | polymer | 570 | 65412.7 | 1 | UniProt (P04839) Pfam (PF01794) Pfam (PF08022) Pfam (PF08030) In PDB | Homo sapiens (human) | |
3 | C | Neutrophil cytosol factor 1 | polymer | 286 | 32813.3 | 1 | UniProt (P14598) Pfam (PF00787) Pfam (PF00018) In PDB | Homo sapiens (human) | |
4 | D | Neutrophil cytosolic factor 2 (65kDa, chronic granulomatous disease, autosomal 2), isoform CRA_a | polymer | 306 | 34978.5 | 1 | UniProt (A0A024R936) Pfam (PF13181) Pfam (PF00018) UniProt (by SIFTS) (P19878) In PDB | Homo sapiens (human) | |
5 | E | Rac family small GTPase 1 | polymer | 192 | 21463.1 | 1 | UniProt (A0A8C8XFZ1) Pfam (PF00071) UniProt (by SIFTS) (P63000) In PDB | Homo sapiens (human) | |
6 | H | 7D5 Fab heavy chain | polymer | 251 | 27603.9 | 1 | Mus musculus | ||
7 | L | 7D5 Fab light chain | polymer | 236 | 26238.2 | 1 | Mus musculus | ||
8 | F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
9 | B | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 2 | Chemie (HEM) | |||
10 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
11 | B, E | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
12 | B | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 1 | Chemie (NDP) | |||
13 | B | DIHYDROFLAVINE-ADENINE DINUCLEOTIDE | non-polymer | 787.6 | 1 | Chemie (FDA) | |||
14 | E | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (GTP) | |||
15 | water | water | 18.0 | 1 | Chemie (HOH) |
Sequence modifications
A: 1 - 195 (UniProt: P13498)
E: 1 - 192 (UniProt: A0A8C8XFZ1)
PDB | External Database | Details |
---|---|---|
Ala 174 | Val 174 | conflict |
PDB | External Database | Details |
---|---|---|
Leu 61 | Gln 61 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 229515.2 | |
Branched | Number of molecules | 1 |
Total formula weight | 586.5 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 3780.2 | |
All* | Total formula weight | 233881.9 |