8WEF
Crystal structure of Brassica napus MIK2 ectodomain in complex with Fusarium oxysporum SCOOPL
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 | polymer | 672 | 74230.6 | 1 | UniProt (A0A816I5A6) Pfam (PF08263) Pfam (PF13855) Pfam (PF00560) | Brassica napus (rape) | |
| 2 | B (C) | a SCOOP-like peptide from F. oxysporum f. sp. conglutinans strain Fo5176 | polymer | 13 | 1349.3 | 1 | Fusarium oxysporum f. sp. pisi HDV247 | ||
| 3 | C (B) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 4 | D, F, G, H (D, F, G, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 5 | E (E) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 6 | I (I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 7 | J, K (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 8 | L, M (A, C) | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
A: 31 - 690 (UniProt: A0A816I5A6)
| PDB | External Database | Details |
|---|---|---|
| Ser 546 | Thr 546 | conflict |
| Glu 691 | - | expression tag |
| Phe 692 | - | expression tag |
| His 693 | - | expression tag |
| His 694 | - | expression tag |
| His 695 | - | expression tag |
| His 696 | - | expression tag |
| His 697 | - | expression tag |
| His 698 | - | expression tag |
| His 699 | - | expression tag |
| His 700 | - | expression tag |
| His 701 | - | expression tag |
| His 702 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 75579.9 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 3587.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 79609.7 |
