8WDV
Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Photosynthetic reaction center cytochrome c subunit | polymer | 383 | 41512.6 | 1 | UniProt (O82947) Pfam (PF02276) | Allochromatium vinosum DSM 180 | |
| 2 | B (L) | Reaction center protein L chain | polymer | 278 | 31217.4 | 1 | UniProt (P51762) Pfam (PF00124) | Allochromatium vinosum DSM 180 | |
| 3 | C (M) | Reaction center protein M chain | polymer | 325 | 36364.2 | 1 | UniProt (P51763) Pfam (PF00124) | Allochromatium vinosum DSM 180 | |
| 4 | D (H) | Photosynthetic reaction center H subunit | polymer | 259 | 28231.3 | 1 | UniProt (D3RPF6) Pfam (PF03967) Pfam (PF05239) | Allochromatium vinosum DSM 180 | |
| 5 | AA, E, EA, GA, IA... (A, I, K, O, Q...) | Antenna complex alpha/beta subunit | polymer | 44 | 5136.1 | 9 | UniProt (D3RP69) Pfam (PF00556) | Allochromatium vinosum DSM 180 | |
| 6 | BA, DA, F, FA, HA... (B, J, N, P, R...) | Antenna complex alpha/beta subunit | polymer | 46 | 5269.1 | 10 | UniProt (D3RP75) Pfam (PF00556) | Allochromatium vinosum DSM 180 | |
| 7 | G, I, S, U, W... (D, F, S, U, W...) | Antenna complex alpha/beta subunit | polymer | 64 | 7244.6 | 6 | UniProt (D3RP74) Pfam (PF00556) | Allochromatium vinosum DSM 180 | |
| 8 | H, J, T, V, X... (E, G, T, V, X...) | Antenna complex alpha/beta subunit | polymer | 47 | 5518.5 | 6 | UniProt (D3RP68) Pfam (PF00556) | Allochromatium vinosum DSM 180 | |
| 9 | CA (3) | Antenna complex alpha/beta subunit | polymer | 66 | 7392.9 | 1 | UniProt (D3RP67) Pfam (PF00556) | Allochromatium vinosum DSM 180 | |
| 10 | KA, LA, MA, NA (C) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 4 | Chemie (HEM) | |||
| 11 | OA (C) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 12 | AC, CB, DD, GC, HD... (D, M, S, F, U...) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 13 | QA (C) | (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate | non-polymer | 568.9 | 1 | Chemie (Z41) | |||
| 14 | RA (C) | PALMITIC ACID | non-polymer | 256.4 | 1 | Chemie (PLM) | |||
| 15 | BB, EC, JB, LB, QB... (L, F, M, H, C...) | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE | non-polymer | 749.0 | 10 | Chemie (PGV) | |||
| 16 | BE, CC, CD, CE, EB... (3, E, S, 4, M...) | BACTERIOCHLOROPHYLL A | non-polymer | 911.5 | 36 | Chemie (BCL) | |||
| 17 | GB, UA (M, L) | BACTERIOPHEOPHYTIN A | non-polymer | 889.2 | 2 | Chemie (BPH) | |||
| 18 | AB, VA, WA (L) | Ubiquinone-8 | non-polymer | 727.1 | 3 | Chemie (UQ8) | |||
| 19 | DB (M) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 20 | HB (M) | MENAQUINONE 8 | non-polymer | 717.1 | 1 | Chemie (MQ8) | |||
| 21 | AD, DC, DE, FD, IB... (R, E, 4, T, M...) | SPIRILLOXANTHIN | non-polymer | 596.9 | 17 | Chemie (CRT) | |||
| 22 | KB, MB, NB, RB, YB (M, H, D) | CARDIOLIPIN | non-polymer | 1464.0 | 5 | Chemie (CDL) | |||
| 23 | OB, SC (M, O) | LAURYL DIMETHYLAMINE-N-OXIDE | non-polymer | 229.4 | 2 | Chemie (LDA) | |||
| 24 | AE, BC, BD, EE, FE... (2, E, R, 4, 5...) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 19 | Chemie (LMT) | |||
| 25 | AF, BF, CF, DF, EF... (K, Q, R, S, T...) | water | water | 18.0 | 354 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 36 |
| Total formula weight | 320212.9 | |
| Non-Polymers* | Number of molecules | 111 |
| Total formula weight | 76301.6 | |
| All* | Total formula weight | 396514.5 |
