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8VYD

A novel synthase generates m4(2)C to stabilize the archaeal ribosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
SAM-dependent methyltransferase, UPF0020 familypolymer29032947.02UniProt (Q5JDR0)
Pfam (PF13649)
Thermococcus kodakarensis
2C, D, E, F, G...
(A)
SODIUM IONnon-polymer23.06Chemie (NA)
3I, J
(A, B)
waterwater18.0182Chemie (HOH)
Sequence modifications
A, B: 1 - 290 (UniProt: Q5JDR0)
PDBExternal DatabaseDetails
Ala 103Arg 103conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight65894.1
Non-Polymers*Number of molecules6
Total formula weight137.9
All*Total formula weight66032.0
*Water molecules are not included.

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PDB entries from 2025-12-03

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