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8VW5

Crystal structure of Cbl-b TKB bound to compound 2

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
E3 ubiquitin-protein ligase CBL-Bpolymer31036205.51UniProt (Q13191)
Pfam (PF02262)
Pfam (PF02761)
Pfam (PF02762)
Homo sapiens (human)Casitas B-lineage lymphoma proto-oncogene b,RING finger protein 56,RING-type E3 ubiquitin transferase CBL-B,SH3-binding protein CBL-B,Signal transduction protein CBL-B
2B
(B)
E3 ubiquitin-protein ligase CBL-Bpolymer31036164.51UniProt (Q13191)
Pfam (PF02262)
Pfam (PF02761)
Pfam (PF02762)
Homo sapiens (human)Casitas B-lineage lymphoma proto-oncogene b,RING finger protein 56,RING-type E3 ubiquitin transferase CBL-B,SH3-binding protein CBL-B,Signal transduction protein CBL-B
3C
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
4D, G
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
5E, F
(A, B)
[5-(2-{(2R,5S)-2-[2-(carboxymethoxy)-3-methoxy-5-nitrophenyl]-3,5-dimethyl-4-oxoimidazolidin-1-yl}-2-oxoethyl)-3,6-dimethoxy-9,9-dimethyl-9H-xanthen-4-yl]acetic acidnon-polymer707.72Chemie (A1AD4)
6H, I
(A, B)
waterwater18.0616Chemie (HOH)
Sequence modifications
A: 36 - 343 (UniProt: Q13191)
PDBExternal DatabaseDetails
Gly 34-expression tag
Ser 35-expression tag
Arg 91Lys 91conflict
Asn 136Gln 136conflict
B: 36 - 343 (UniProt: Q13191)
PDBExternal DatabaseDetails
Gly 34-expression tag
Ser 35-expression tag
Asn 136Gln 136conflict
Thr 170Asn 170conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight72370.1
Non-Polymers*Number of molecules5
Total formula weight1519.8
All*Total formula weight73889.9
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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