8VQ8
Immune receptor complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | T cell receptor - LCK1-1 TRAV6-5 alpha chain | polymer | 207 | 22889.1 | 1 | Mus musculus | ||
| 2 | B (B) | T cell receptor - LCK1-1 TRBV1 Beta chain | polymer | 243 | 27806.3 | 1 | Mus musculus | ||
| 3 | C (C) | H-2 class II histocompatibility antigen, A-B alpha chain | polymer | 188 | 21204.7 | 1 | UniProt (P14434) Pfam (PF00993) Pfam (PF07654) | Mus musculus (house mouse) | IAalpha |
| 4 | D (D) | Nucleoprotein,H-2 class II histocompatibility antigen, A beta chain | polymer | 228 | 26266.2 | 1 | UniProt (P69296) UniProt (P14483) Pfam (PF00969) Pfam (PF07654) | Influenza A virus | Nucleocapsid protein,Protein N |
| 5 | E, F, G, H, I... (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 15 | Chemie (EDO) | |||
| 6 | S (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 7 | U, V, W, X (A, B, C, D) | water | water | 18.0 | 359 | Chemie (HOH) |
Sequence modifications
C: 1 - 180 (UniProt: P14434)
D: -25 - -13 (UniProt: P69296)
D: -13 - 186 (UniProt: P14483)
| PDB | External Database | Details |
|---|---|---|
| Thr 181 | - | expression tag |
| Ser 182 | - | expression tag |
| Gly 183 | - | expression tag |
| Leu 184 | - | expression tag |
| Glu 185 | - | expression tag |
| Val 186 | - | expression tag |
| Leu 187 | - | expression tag |
| Phe 188 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -13 | - | linker |
| Ser -13 | - | linker |
| Gly -13 | - | linker |
| Gly -13 | - | linker |
| Ser -13 | - | linker |
| Ile -13 | - | linker |
| Glu -13 | - | linker |
| Gly -13 | - | linker |
| Arg -13 | - | linker |
| Gly -13 | - | linker |
| Gly -13 | - | linker |
| Ser -13 | - | linker |
| Gly -13 | - | linker |
| Ala -13 | - | linker |
| Ser -13 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Thr 187 | - | expression tag |
| Gly 188 | - | expression tag |
| Gly 189 | - | expression tag |
| Leu 190 | - | expression tag |
| Glu 191 | - | expression tag |
| Val 192 | - | expression tag |
| Leu 193 | - | expression tag |
| Phe 194 | - | expression tag |
| Gln 195 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 98166.3 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 1152.2 | |
| All* | Total formula weight | 99318.5 |
