8VLM
Crystal structure of the yeast cytosine deaminase (yCD) E64V-M100W heterodimer
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Cytosine deaminase | polymer | 180 | 19868.7 | 2 | UniProt (Q12178) Pfam (PF00383) | Saccharomyces cerevisiae (brewer's yeast) | yCD,Cytosine aminohydrolase,Fluorocytosine resistance protein 1 |
| 2 | B, D (B, D) | Cytosine deaminase | polymer | 178 | 19756.4 | 2 | UniProt (Q12178) Pfam (PF00383) | Saccharomyces cerevisiae (brewer's yeast) | yCD,Cytosine aminohydrolase,Fluorocytosine resistance protein 1 |
| 3 | E, F, I, K (A, B, C, D) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 4 | G, H, J, L (B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 5 | M, N, O, P (A, B, C, D) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 158 (UniProt: Q12178)
B, D: 1 - 158 (UniProt: Q12178)
| PDB | External Database | Details |
|---|---|---|
| Met -21 | - | initiating methionine |
| Gly -20 | - | expression tag |
| Ser -19 | - | expression tag |
| Ala -18 | - | expression tag |
| Trp -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| Pro -14 | - | expression tag |
| Gln -13 | - | expression tag |
| Phe -12 | - | expression tag |
| Glu -11 | - | expression tag |
| Lys -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Val 64 | Glu 64 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Trp 100 | Met 100 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 79250.1 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 509.9 | |
| All* | Total formula weight | 79760.0 |






