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8VFF

Binary DNA Polymerase Beta bound to DNA containing primer terminal FapydG base-paired with a dA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (human)
2B
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164853.21synthetic construct
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(FAP))-3')polymer103119.01synthetic construct
4D
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
5E, F
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
6G, H, I, J
(A, T, P, D)
waterwater18.0368Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47749.9
Non-Polymers*Number of molecules2
Total formula weight46.0
All*Total formula weight47795.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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