8VDT
DNA Ligase 1 with nick DNA 3'rA:T
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA ligase 1 | polymer | 658 | 73042.3 | 1 | UniProt (P18858) Pfam (PF04675) Pfam (PF01068) Pfam (PF04679) | Homo sapiens (human) | DNA ligase I,Polydeoxyribonucleotide synthase [ATP] 1 |
| 2 | B (B) | DNA/RNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*T)-R(P*A)-D(P*GP*TP*CP*GP*GP*AP*C)-3') | polymer | 18 | 5572.6 | 1 | synthetic construct | ||
| 3 | C (C) | DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*TP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') | polymer | 18 | 5461.5 | 1 | synthetic construct | ||
| 4 | D (B) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 5 | E, F, G (A, B, C) | water | water | 18.0 | 25 | Chemie (HOH) |
Sequence modifications
A: 261 - 918 (UniProt: P18858)
| PDB | External Database | Details |
|---|---|---|
| Ala 346 | Glu 346 | conflict |
| Ala 592 | Glu 592 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 84076.4 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 95.0 | |
| All* | Total formula weight | 84171.4 |
