8V3N
CCP5 in complex with Glu-P-Glu transition state analog
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Cytosolic carboxypeptidase-like protein 5 | polymer | 524 | 59170.7 | 1 | UniProt (Q8NDL9) Pfam (PF18027) Pfam (PF00246) | Homo sapiens (human) | ATP/GTP-binding protein-like 5,Protein deglutamylase CCP5 |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C, D (A) | D-MALATE | non-polymer | 134.1 | 2 | Chemie (MLT) | |||
| 4 | E (A) | (2S)-2-{[(S)-[(3S)-3-acetamido-4-(ethylamino)-4-oxobutyl](hydroxy)phosphoryl]methyl}pentanedioic acid | non-polymer | 380.3 | 1 | Chemie (A1AAG) | |||
| 5 | F (A) | water | water | 18.0 | 170 | Chemie (HOH) |
Sequence modifications
A: 2 - 338 (UniProt: Q8NDL9)
A: 425 - 605 (UniProt: Q8NDL9)
| PDB | External Database | Details |
|---|---|---|
| Asn 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 339 | - | linker |
| Gly 421 | - | linker |
| Ser 422 | - | linker |
| Gly 423 | - | linker |
| Gly 424 | - | linker |
| Ala 516 | Glu 516 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 59170.7 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 713.9 | |
| All* | Total formula weight | 59884.6 |
