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8V0C

Structure of TDP1 catalytic domain complexed with compound IB06

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Tyrosyl-DNA phosphodiesterase 1polymer46152126.32UniProt (Q9NUW8)
Pfam (PF06087)
Homo sapiens (human)Tyr-DNA phosphodiesterase 1
2C, D, E, F, G...
(A, B)
1,2-ETHANEDIOLnon-polymer62.18Chemie (EDO)
3H, N
(A, B)
(8M)-8-(2-{[2-(fluorosulfonyl)ethyl]amino}phenyl)-4-oxo-1,4-dihydroquinoline-3-carboxylic acidnon-polymer390.42Chemie (YE3)
4I, O
(A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
5J
(A)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
6P, Q
(A, B)
waterwater18.0721Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight104252.7
Non-Polymers*Number of molecules13
Total formula weight1567.7
All*Total formula weight105820.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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