8U4D
TRPV1 in nanodisc bound with PI-Br4, consensus structure
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D, B, C | Transient receptor potential cation channel subfamily V member 1 | polymer | 635 | 72888.2 | 4 | UniProt (O35433) Pfam (PF00023) Pfam (PF00520) In PDB | Rattus norvegicus (Norway rat) | |
2 | A, D, B, C | (2S)-2-[(9,10-dibromooctadecanoyl)oxy]-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9R,10S)-9,10-dibromooctadecanoate | non-polymer | 1182.7 | 4 | Chemie (VPN) | |||
3 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
4 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
A, D, B, C: 110 - 764 (UniProt: O35433)
PDB | External Database | Details |
---|---|---|
Met 107 | - | initiating methionine |
Gly 108 | - | expression tag |
Ser 109 | - | expression tag |
- | Asn 604 | deletion |
- | Asn 605 | deletion |
- | Ser 606 | deletion |
- | Leu 607 | deletion |
- | Pro 608 | deletion |
- | Met 609 | deletion |
- | Glu 610 | deletion |
- | Ser 611 | deletion |
- | Thr 612 | deletion |
- | Pro 613 | deletion |
- | His 614 | deletion |
- | Lys 615 | deletion |
- | Cys 616 | deletion |
- | Arg 617 | deletion |
- | Gly 618 | deletion |
- | Ser 619 | deletion |
- | Ala 620 | deletion |
- | Cys 621 | deletion |
- | Lys 622 | deletion |
- | Pro 623 | deletion |
- | Gly 624 | deletion |
- | Asn 625 | deletion |
- | Ser 626 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 291552.9 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 4753.9 | |
All* | Total formula weight | 296306.8 |