8U1U

Structure of a class A GPCR/agonist complex

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	C-C motif chemokine 1,C-C chemokine receptor type 8,EGFP fusion protein	polymer	743	83236.7	1	UniProt (P22362) UniProt (P51685) UniProt (A0A6M5E0N3) Pfam (PF00048) Pfam (PF00001) In PDB	Homo sapiens (human)
2	B	Guanine nucleotide-binding protein G(i) subunit alpha-1	polymer	376	43182.1	1	UniProt (P63096) Pfam (PF00503) In PDB	Homo sapiens (human)
3	C	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	polymer	357	39518.1	1	UniProt (P62873) Pfam (PF00400) In PDB	Homo sapiens (human)
4	D	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2	polymer	71	7861.1	1	UniProt (P59768) Pfam (PF00631) In PDB	Homo sapiens (human)	G gamma-I
5	E	scFv fragment	polymer	259	28124.4	1		Mus musculus (mouse)
6	A	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	1	Chemie (NAG)

Sequence modifications

A: 24 - 93 (UniProt: P22362)

PDB	External Database	Details
Cys 38	Ala 38	conflict
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 93	-	linker
Gly 93	-	linker
Ser 94	-	linker

A: 94 - 451 (UniProt: P51685)

PDB	External Database	Details
Cys 117	Phe 21	conflict
Gly 452	-	linker
Gly 453	-	linker
Ser 454	-	linker
Asp 455	-	linker
Tyr 456	-	linker
Lys 457	-	linker
Asp 458	-	linker
Asp 459	-	linker
Asp 460	-	linker
Asp 461	-	linker
Lys 462	-	linker
Gly 463	-	linker
Gly 464	-	linker
Ser 465	-	linker
Leu 466	-	linker
Glu 467	-	linker
Val 468	-	linker
Leu 469	-	linker
Phe 470	-	linker
Gln 471	-	linker
Gly 472	-	linker
Pro 473	-	linker

A: 474 - 712 (UniProt: A0A6M5E0N3)

PDB	External Database	Details
Leu 520	Phe 47	conflict
Gly 539	Thr 66	conflict
Leu 542	Val 69	conflict
Ala 546	Ser 73	conflict
Thr 627	Met 154	conflict
Ala 637	Val 164	conflict
Gly 649	Ser 176	conflict
Gln 658	His 185	conflict
Tyr 677	Thr 204	conflict
Lys 680	Ala 207	conflict
Gly 713	-	expression tag
Ser 714	-	expression tag
Ala 715	-	expression tag
Trp 716	-	expression tag
Ser 717	-	expression tag
His 718	-	expression tag
Pro 719	-	expression tag
Gln 720	-	expression tag
Phe 721	-	expression tag
Glu 722	-	expression tag
Lys 723	-	expression tag
Gly 724	-	expression tag
Gly 725	-	expression tag
Gly 726	-	expression tag
Ser 727	-	expression tag
Gly 728	-	expression tag
Gly 729	-	expression tag
Gly 730	-	expression tag
Ser 731	-	expression tag
Gly 732	-	expression tag
Gly 733	-	expression tag
Ser 734	-	expression tag
Ala 735	-	expression tag
Trp 736	-	expression tag
Ser 737	-	expression tag
His 738	-	expression tag
Pro 739	-	expression tag
Gln 740	-	expression tag
Phe 741	-	expression tag
Glu 742	-	expression tag
Lys 743	-	expression tag

B: 1 - 354 (UniProt: P63096)

PDB	External Database	Details
Met -21	-	initiating methionine
Lys -20	-	expression tag
Lys -19	-	expression tag
His -18	-	expression tag
His -17	-	expression tag
His -16	-	expression tag
His -15	-	expression tag
His -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
Glu -8	-	expression tag
Asn -7	-	expression tag
Leu -6	-	expression tag
Tyr -5	-	expression tag
Phe -4	-	expression tag
Gln -3	-	expression tag
Gly -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag

C: 2 - 340 (UniProt: P62873)

PDB	External Database	Details
Met -16	-	initiating methionine
His -15	-	expression tag
His -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
His -8	-	expression tag
Gly -7	-	expression tag
Glu -6	-	expression tag
Asn -5	-	expression tag
Leu -4	-	expression tag
Tyr -3	-	expression tag
Phe -2	-	expression tag
Gln -1	-	expression tag
Gly 0	-	expression tag
Ser 1	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	5
	Total formula weight	201922.4
Non-Polymers*	Number of molecules	1
	Total formula weight	221.2
All*	Total formula weight	202143.6

*Water molecules are not included.