8TW4
TCR in nanodisc ND-I
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | TCR alpha | polymer | 274 | 30388.2 | 1 | Homo sapiens (human) | ||
2 | B | T cell receptor beta variable 6-5, T cell receptor beta chain MC.7.G5, MCHERRY fusion protein | polymer | 556 | 62042.9 | 1 | UniProt (A0A0K0K1A5) UniProt (P0DTU4) UniProt (A0A4D6FVK6) In PDB | Homo sapiens (human) | TR beta chain TRBV25-1*01J2S3*01C2*01,MC.7.G5 TRB |
3 | E, F | T-cell surface glycoprotein CD3 epsilon chain | polymer | 207 | 23174.2 | 2 | UniProt (P07766) In PDB | Homo sapiens (human) | |
4 | D | T-cell surface glycoprotein CD3 delta chain | polymer | 171 | 18949.5 | 1 | UniProt (P04234) In PDB | Homo sapiens (human) | T-cell receptor T3 delta chain |
5 | G | T-cell surface glycoprotein CD3 gamma chain | polymer | 190 | 21598.6 | 1 | UniProt (P09693) In PDB | Homo sapiens (human) | T-cell receptor T3 gamma chain |
6 | X, Y | T-cell surface glycoprotein CD3 zeta chain,RNA-directed RNA polymerase L | polymer | 412 | 46650.9 | 2 | UniProt (P20963) UniProt (A0A5P9VSM8) In PDB | Homo sapiens (human) | T-cell receptor T3 zeta chain,Large structural protein,Replicase,Transcriptase |
7 | C, H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
8 | I | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
9 | A, G | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
10 | B, Y | CHOLESTEROL | non-polymer | 386.7 | 2 | Chemie (CLR) |
Sequence modifications
B: 1 - 114 (UniProt: A0A0K0K1A5)
B: 128 - 311 (UniProt: P0DTU4)
B: 322 - 556 (UniProt: A0A4D6FVK6)
G: 1 - 182 (UniProt: P09693)
X, Y: 1 - 164 (UniProt: P20963)
X, Y: 175 - 412 (UniProt: A0A5P9VSM8)
PDB | External Database | Details |
---|---|---|
Val 115 | - | linker |
Gly 116 | - | linker |
Asn 117 | - | linker |
Thr 118 | - | linker |
Gly 119 | - | linker |
Glu 120 | - | linker |
Leu 121 | - | linker |
Phe 122 | - | linker |
Phe 123 | - | linker |
Gly 124 | - | linker |
Glu 125 | - | linker |
Gly 126 | - | linker |
Ser 127 | - | linker |
PDB | External Database | Details |
---|---|---|
Ala 312 | - | linker |
Ser 313 | - | linker |
Leu 314 | - | linker |
Glu 315 | - | linker |
Val 316 | - | linker |
Leu 317 | - | linker |
Phe 318 | - | linker |
Gln 319 | - | linker |
Gly 320 | - | linker |
Pro 321 | - | linker |
G: 1 - 182 (UniProt: P09693)
PDB | External Database | Details |
---|---|---|
His 183 | - | expression tag |
His 184 | - | expression tag |
His 185 | - | expression tag |
His 186 | - | expression tag |
His 187 | - | expression tag |
His 188 | - | expression tag |
His 189 | - | expression tag |
His 190 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 165 | - | linker |
Ser 166 | - | linker |
Leu 167 | - | linker |
Glu 168 | - | linker |
Val 169 | - | linker |
Leu 170 | - | linker |
Phe 171 | - | linker |
Gln 172 | - | linker |
Gly 173 | - | linker |
Pro 174 | - | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 272629.5 | |
Branched | Number of molecules | 3 |
Total formula weight | 1435.3 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 1436.9 | |
All* | Total formula weight | 275501.7 |