8TPU
Subtomogram averaged consensus structure of the malarial 80S ribosome in Plasmodium falciparum-infected human erythrocytes
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | S1 | 40S ribosomal protein S24 | polymer | 133 | 15431.5 | 1 | UniProt (Q8I3R6) Pfam (PF01282) In PDB | Plasmodium falciparum 3D7 | |
| 2 | S2 | 40S ribosomal protein S25 | polymer | 105 | 11691.9 | 1 | UniProt (Q8ILN8) Pfam (PF03297) In PDB | Plasmodium falciparum 3D7 | |
| 3 | S3 | 40S ribosomal protein S26 | polymer | 107 | 12539.7 | 1 | UniProt (O96258) Pfam (PF01283) In PDB | Plasmodium falciparum 3D7 | |
| 4 | S4 | 40S ribosomal protein S27 | polymer | 82 | 9154.9 | 1 | UniProt (Q8IEN2) Pfam (PF01667) In PDB | Plasmodium falciparum 3D7 | |
| 5 | S5 | 60S ribosomal protein L41 | polymer | 58 | 6516.6 | 1 | Plasmodium falciparum 3D7 | ||
| 6 | S6 | Small ribosomal subunit protein eS30 | polymer | 43 | 4925.8 | 1 | UniProt (O96269) Pfam (PF04758) In PDB | Plasmodium falciparum 3D7 | |
| 7 | S7 | 60S ribosomal protein L24, putative | polymer | 74 | 23774.1 | 1 | Plasmodium falciparum 3D7 | ||
| 8 | SA | 18S ribosomal RNA | polymer | 2087 | 669744.6 | 1 | GenBank (1013064538) | Plasmodium falciparum 3D7 | |
| 9 | SB | 40S ribosomal protein S3a | polymer | 262 | 30111.7 | 1 | UniProt (O97313) Pfam (PF01015) In PDB | Plasmodium falciparum 3D7 | |
| 10 | SC | 40S ribosomal protein SA | polymer | 263 | 29891.2 | 1 | UniProt (Q8IJD4) Pfam (PF00318) In PDB | Plasmodium falciparum 3D7 | |
| 11 | SD | 40S ribosomal protein S3 | polymer | 221 | 24709.9 | 1 | UniProt (Q8IKH8) Pfam (PF07650) Pfam (PF00189) In PDB | Plasmodium falciparum 3D7 | |
| 12 | SE | 40S ribosomal protein S9, putative | polymer | 189 | 22172.1 | 1 | UniProt (Q8I3R0) Pfam (PF00163) Pfam (PF01479) In PDB | Plasmodium falciparum 3D7 | |
| 13 | SF | 40S ribosomal protein S4 | polymer | 261 | 29830.3 | 1 | UniProt (Q8IIU8) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) In PDB | Plasmodium falciparum 3D7 | |
| 14 | SG | 40S ribosomal protein S5 | polymer | 272 | 30008.8 | 1 | UniProt (Q8IL02) Pfam (PF00333) Pfam (PF03719) In PDB | Plasmodium falciparum 3D7 | |
| 15 | SH | 40S ribosomal protein S6 | polymer | 306 | 35473.8 | 1 | UniProt (Q8IDR9) Pfam (PF01092) In PDB | Plasmodium falciparum 3D7 | |
| 16 | SI | 40S ribosomal protein S5, putative | polymer | 195 | 21898.5 | 1 | UniProt (Q8IBN5) Pfam (PF00177) In PDB | Plasmodium falciparum 3D7 | |
| 17 | SJ | 40S ribosomal protein S7 | polymer | 194 | 22524.7 | 1 | UniProt (Q8IET7) Pfam (PF01251) In PDB | Plasmodium falciparum 3D7 | |
| 18 | SK | 40S ribosomal protein S15A, putative | polymer | 130 | 14900.7 | 1 | UniProt (O77395) Pfam (PF00410) In PDB | Plasmodium falciparum 3D7 | |
| 19 | SL | 40S ribosomal protein S8 | polymer | 218 | 25106.0 | 1 | UniProt (Q8IM10) Pfam (PF01201) In PDB | Plasmodium falciparum 3D7 | |
| 20 | SM | 40S ribosomal protein S16 | polymer | 144 | 16318.2 | 1 | UniProt (A0A0L7M7C8) Pfam (PF00380) In PDB | Plasmodium falciparum 3D7 | |
| 21 | SN | 40S ribosomal protein S20e, putative | polymer | 118 | 13534.9 | 1 | UniProt (Q8IK02) Pfam (PF00338) In PDB | Plasmodium falciparum 3D7 | |
| 22 | SO | 40S ribosomal protein S10, putative | polymer | 137 | 16510.2 | 1 | UniProt (Q8IBQ5) Pfam (PF03501) In PDB | Plasmodium falciparum 3D7 | |
| 23 | SP | 40S ribosomal protein S11 | polymer | 151 | 16105.6 | 1 | UniProt (A0A5K1K925) Pfam (PF00411) In PDB | Plasmodium falciparum 3D7 | |
| 24 | SQ | 40S ribosomal protein S23, putative | polymer | 145 | 16167.0 | 1 | UniProt (O97248) Pfam (PF00164) In PDB | Plasmodium falciparum 3D7 | |
| 25 | SR | 40S ribosomal protein S12 | polymer | 141 | 15414.4 | 1 | UniProt (O97249) Pfam (PF01248) In PDB | Plasmodium falciparum 3D7 | |
| 26 | SS | 40S ribosomal protein S18, putative | polymer | 156 | 17928.9 | 1 | UniProt (Q8IIA2) Pfam (PF00416) In PDB | Plasmodium falciparum 3D7 | |
| 27 | ST | 40S ribosomal protein S29, putative | polymer | 54 | 6430.7 | 1 | UniProt (C0H4K8) Pfam (PF00253) In PDB | Plasmodium falciparum 3D7 | |
| 28 | SU | 40S ribosomal protein S15 | polymer | 151 | 17286.5 | 1 | UniProt (Q8IDB0) Pfam (PF08069) Pfam (PF00312) In PDB | Plasmodium falciparum 3D7 | |
| 29 | SV | 40S ribosomal protein S11, putative | polymer | 161 | 18801.2 | 1 | UniProt (O77381) Pfam (PF16205) Pfam (PF00366) In PDB | Plasmodium falciparum 3D7 | |
| 30 | SW | 40S ribosomal protein S17, putative | polymer | 137 | 16097.0 | 1 | UniProt (Q8I502) Pfam (PF00833) In PDB | Plasmodium falciparum 3D7 | |
| 31 | SX | 40S ribosomal protein S19 | polymer | 145 | 16800.8 | 1 | UniProt (C0H5C2) Pfam (PF00203) In PDB | Plasmodium falciparum 3D7 | |
| 32 | SY | 40S ribosomal protein S19 | polymer | 170 | 19757.9 | 1 | UniProt (Q8IFP2) Pfam (PF01090) In PDB | Plasmodium falciparum 3D7 | |
| 33 | SZ | 40S ribosomal protein S21 | polymer | 82 | 9157.5 | 1 | UniProt (Q8IHS5) Pfam (PF01249) In PDB | Plasmodium falciparum 3D7 | |
| 34 | AA | 28S ribosomal RNA | polymer | 3788 | 1216212.1 | 1 | Plasmodium falciparum 3D7 | ||
| 35 | AC | 5.8S ribosomal RNA | polymer | 159 | 51206.5 | 1 | GenBank (1162436939) | Plasmodium falciparum 3D7 | |
| 36 | AB | 5S ribosomal RNA | polymer | 119 | 38410.9 | 1 | Plasmodium falciparum 3D7 | ||
| 37 | AL | 60S ribosomal protein L13 | polymer | 215 | 25508.2 | 1 | UniProt (Q8IAX6) Pfam (PF01294) In PDB | Plasmodium falciparum 3D7 | |
| 38 | A1 | 60S ribosomal protein L27 | polymer | 146 | 16785.2 | 1 | UniProt (Q8IKM5) Pfam (PF01777) In PDB | Plasmodium falciparum 3D7 | |
| 39 | A2 | 60S ribosomal protein L28 | polymer | 126 | 14309.7 | 1 | Plasmodium falciparum 3D7 | ||
| 40 | A4 | 60S ribosomal protein L29 | polymer | 67 | 8041.6 | 1 | UniProt (C6S3J6) Pfam (PF01779) In PDB | Plasmodium falciparum 3D7 | |
| 41 | A6 | 60S ribosomal protein L30e, putative | polymer | 107 | 11679.7 | 1 | Plasmodium falciparum 3D7 | ||
| 42 | A7 | 60S ribosomal protein L31 | polymer | 120 | 14099.9 | 1 | UniProt (Q8I463) Pfam (PF01198) In PDB | Plasmodium falciparum 3D7 | |
| 43 | AN | 60S ribosomal protein L14, putative | polymer | 165 | 19340.4 | 1 | UniProt (Q8ILE8) Pfam (PF01929) In PDB | Plasmodium falciparum 3D7 | |
| 44 | A8 | 60S ribosomal protein L32 | polymer | 130 | 15466.6 | 1 | Plasmodium falciparum 3D7 | ||
| 45 | A9 | 60S ribosomal protein L35ae, putative | polymer | 139 | 16249.4 | 1 | Plasmodium falciparum 3D7 | ||
| 46 | Aa | 60S ribosomal protein L34 | polymer | 149 | 17349.9 | 1 | Plasmodium falciparum 3D7 | ||
| 47 | Ab | 60S ribosomal protein L36 | polymer | 112 | 12825.4 | 1 | UniProt (Q8I713) Pfam (PF01158) In PDB | Plasmodium falciparum 3D7 | |
| 48 | Ad | 60S ribosomal protein L38 | polymer | 87 | 10341.7 | 1 | UniProt (Q8II62) Pfam (PF01781) In PDB | Plasmodium falciparum 3D7 | |
| 49 | Ae | 60S ribosomal protein L39 | polymer | 51 | 6540.9 | 1 | UniProt (C0H4H3) Pfam (PF00832) In PDB | Plasmodium falciparum 3D7 | |
| 50 | Af | Ubiquitin-60S ribosomal protein L40 | polymer | 128 | 14645.2 | 1 | UniProt (Q8ID50) Pfam (PF00240) Pfam (PF01020) In PDB | Plasmodium falciparum 3D7 | |
| 51 | AP | Ribosomal protein L15 | polymer | 203 | 23985.4 | 1 | Plasmodium falciparum 3D7 | ||
| 52 | Ah | Large ribosomal subunit protein eL43 | polymer | 95 | 10755.0 | 1 | Plasmodium falciparum 3D7 | ||
| 53 | Ai | Large ribosomal subunit protein eL42 | polymer | 103 | 12065.7 | 1 | Plasmodium falciparum 3D7 | ||
| 54 | AI | 60S ribosomal protein L6, putative | polymer | 221 | 25587.6 | 1 | UniProt (A0A5K1K8V8) Pfam (PF01159) In PDB | Plasmodium falciparum 3D7 | |
| 55 | AJ | 60S ribosomal protein L7a | polymer | 283 | 32760.5 | 1 | UniProt (Q8ILL2) Pfam (PF01248) In PDB | Plasmodium falciparum 3D7 | |
| 56 | Ac | Ribosomal protein L37 | polymer | 92 | 10571.6 | 1 | UniProt (C0H4L5) Pfam (PF01907) In PDB | Plasmodium falciparum 3D7 | |
| 57 | AK | 60S ribosomal protein L13, putative | polymer | 202 | 23805.3 | 1 | UniProt (Q8IJZ7) Pfam (PF00572) In PDB | Plasmodium falciparum 3D7 | |
| 58 | AM | 60S ribosomal protein L23, putative | polymer | 139 | 15015.7 | 1 | UniProt (Q8IE09) Pfam (PF00238) In PDB | Plasmodium falciparum 3D7 | |
| 59 | AS | 60S ribosomal protein L18-2, putative | polymer | 187 | 21508.8 | 1 | UniProt (C0H5G3) Pfam (PF17135) In PDB | Plasmodium falciparum 3D7 | |
| 60 | AO | 60S ribosomal protein L27a, putative | polymer | 148 | 16765.8 | 1 | UniProt (C6KT23) Pfam (PF00828) In PDB | Plasmodium falciparum 3D7 | |
| 61 | AQ | 60S ribosomal protein L10, putative | polymer | 219 | 25265.5 | 1 | UniProt (Q8ILV2) Pfam (PF00252) In PDB | Plasmodium falciparum 3D7 | |
| 62 | AR | 60S ribosomal protein L5, putative | polymer | 294 | 34067.4 | 1 | UniProt (Q8ILL3) Pfam (PF17144) Pfam (PF14204) In PDB | Plasmodium falciparum 3D7 | |
| 63 | AW | 60S ribosomal protein L17, putative | polymer | 173 | 19431.0 | 1 | Plasmodium falciparum 3D7 | ||
| 64 | AY | 60S ribosomal protein L23 | polymer | 190 | 22152.7 | 1 | UniProt (Q8IE82) Pfam (PF03939) Pfam (PF00276) In PDB | Plasmodium falciparum 3D7 | |
| 65 | AT | 60S ribosomal protein L19 | polymer | 182 | 21641.1 | 1 | UniProt (C6KSY6) Pfam (PF01280) In PDB | Plasmodium falciparum 3D7 | |
| 66 | AZ | 60S ribosomal protein L26, putative | polymer | 126 | 14855.7 | 1 | UniProt (O77364) Pfam (PF16906) Pfam (PF00467) In PDB | Plasmodium falciparum 3D7 | |
| 67 | A3 | 60S ribosomal protein L35, putative | polymer | 124 | 14787.8 | 1 | UniProt (Q8IIB4) Pfam (PF00831) In PDB | Plasmodium falciparum 3D7 | |
| 68 | A5 | 60S ribosomal protein L7, putative | polymer | 257 | 30593.2 | 1 | UniProt (O97250) Pfam (PF08079) Pfam (PF00327) In PDB | Plasmodium falciparum 3D7 | |
| 69 | AD | 60S ribosomal protein L2 | polymer | 260 | 28065.0 | 1 | UniProt (Q8I3T9) Pfam (PF00181) Pfam (PF03947) In PDB | Plasmodium falciparum 3D7 | |
| 70 | AE | 60S ribosomal protein L3 | polymer | 386 | 44318.2 | 1 | UniProt (Q8IJC6) Pfam (PF00297) In PDB | Plasmodium falciparum 3D7 | |
| 71 | AF | 60S ribosomal protein L4 | polymer | 411 | 46311.7 | 1 | UniProt (Q8I431) Pfam (PF00573) Pfam (PF14374) In PDB | Plasmodium falciparum 3D7 | |
| 72 | AG | 60S ribosomal protein L11a, putative | polymer | 173 | 20268.7 | 1 | UniProt (Q8IBQ6) Pfam (PF00281) Pfam (PF00673) In PDB | Plasmodium falciparum 3D7 | |
| 73 | AU | 60S ribosomal protein L18a | polymer | 184 | 21793.6 | 1 | UniProt (Q8IDS6) Pfam (PF01775) In PDB | Plasmodium falciparum 3D7 | |
| 74 | AH | 60S ribosomal protein L6, putative | polymer | 190 | 21638.6 | 1 | UniProt (Q8IE85) Pfam (PF00347) In PDB | Plasmodium falciparum 3D7 | |
| 75 | AV | 60S ribosomal protein L21 | polymer | 162 | 18969.4 | 1 | Plasmodium falciparum 3D7 | ||
| 76 | Ag | 60S ribosomal protein L41 | polymer | 39 | 5108.3 | 1 | UniProt (C6S3G4) Pfam (PF05162) In PDB | Plasmodium falciparum 3D7 | |
| 77 | AX | 60S ribosomal protein L22, putative | polymer | 139 | 16422.9 | 1 | UniProt (Q8IB51) Pfam (PF01776) In PDB | Plasmodium falciparum 3D7 | |
| 78 | A0 | 60S ribosomal protein L24, putative | polymer | 162 | 19295.9 | 1 | UniProt (Q8IEM3) Pfam (PF01246) In PDB | Plasmodium falciparum 3D7 | |
| 79 | S8 | Receptor for activated c kinase | polymer | 323 | 35726.3 | 1 | UniProt (Q8IBA0) Pfam (PF00400) In PDB | Plasmodium falciparum 3D7 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 79 |
| Total formula weight | 3419265.1 | |
| All* | Total formula weight | 3419265.1 |
