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8T9G

Automethylated PRC2 dimer bound to nucleosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, Q
(B, G)
Polycomb protein SUZ12polymer61972266.42UniProt (Q15022)
Pfam (PF09733)
Homo sapiens (human)Chromatin precipitated E2F target 9 protein,ChET 9 protein,Joined to JAZF1 protein,Suppressor of zeste 12 protein homolog
2B, R
(C, I)
Histone-lysine N-methyltransferase EZH2polymer75386175.02UniProt (Q15910)
Pfam (PF11616)
Pfam (PF18118)
Pfam (PF21358)
Pfam (PF18264)
Pfam (PF00856)
Homo sapiens (human)ENX-1,Enhancer of zeste homolog 2,Lysine N-methyltransferase 6
3C, S
(F, K)
Polycomb protein EEDpolymer44150267.72UniProt (O75530)
Pfam (PF00400)
Homo sapiens (human)hEED,Embryonic ectoderm development protein,WD protein associating with integrin cytoplasmic tails 1,WAIT-1
4D, T
(L, O)
Histone-binding protein RBBP4polymer42547709.52UniProt (Q09028)
Pfam (PF12265)
Pfam (PF00400)
Homo sapiens (human)Chromatin assembly factor 1 subunit C,CAF-1 subunit C,Chromatin assembly factor I p48 subunit,CAF-I 48 kDa subunit,CAF-I p48,Nucleosome-remodeling factor subunit RBAP48,Retinoblastoma-binding protein 4,RBBP-4,Retinoblastoma-binding protein p48
5E, U
(M, Y)
Zinc finger protein AEBP2polymer30334183.22UniProt (Q6ZN18)Homo sapiens (human)Adipocyte enhancer-binding protein 2,AE-binding protein 2
6F, N
(A, W)
Histone H3.2polymer13615435.12UniProt (P84233)
Pfam (PF00125)
Xenopus laevis (African clawed frog)
7G
(H)
DNA (226-MER)polymer21566539.31synthetic construct
8H, O
(J, X)
Histone H4polymer10611625.62UniProt (P62799)
Pfam (PF15511)
Xenopus laevis (African clawed frog)
9I, L
(R, U)
Histone H2A type 1polymer13314355.72UniProt (P06897)
Pfam (PF00125)
Pfam (PF16211)
Xenopus laevis (African clawed frog)
10J, M
(S, V)
Histone H2B 1.1polymer12313655.92UniProt (P02281)
Pfam (PF00125)
Xenopus laevis (African clawed frog)H2B1.1
11K
(T)
DNA (226-MER)polymer21565905.91synthetic construct
12P
(E)
activating methylated peptidepolymer121125.41Homo sapiens (human)
13V, W
(C, I)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
Sequence modifications
B, G: 68 - 685 (UniProt: Q15022)
PDBExternal DatabaseDetails
Met 67-initiating methionine
C, I: 2 - 751 (UniProt: Q15910)
PDBExternal DatabaseDetails
Ser -1-expression tag
Asn 0-expression tag
Ala 1-expression tag
Ala 14Cys 14conflict
Cys 15Trp 15conflict
M, Y: 9 - 309 (UniProt: Q6ZN18)
PDBExternal DatabaseDetails
Ser 7-expression tag
Asn 8-expression tag
Ala 9Met 1conflict
A, W: 0 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103conflict
J, X: 0 - 102 (UniProt: P62799)
PDBExternal DatabaseDetails
Ser 103-expression tag
Ser 104-expression tag
Gly 105-expression tag
R, U: 0 - 129 (UniProt: P06897)
PDBExternal DatabaseDetails
Ser -3-expression tag
Asn -2-expression tag
Ala -1-expression tag
Arg 99Gly 100conflict
Cys 119Lys 120conflict
Ser 123Ala 124conflict
S, V: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Thr 29Ser 33conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains21
Total formula weight824918.8
Non-Polymers*Number of molecules2
Total formula weight768.8
All*Total formula weight825687.7
*Water molecules are not included.

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PDB entries from 2024-11-13

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