8SVA
Structure of the Rhodococcus sp. USK13 DarR-20 bp DNA complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F, G, T | TetR/AcrR family transcriptional regulator | polymer | 212 | 23747.8 | 4 | UniProt (A0A2S8J6Y8) Pfam (PF00440) Pfam (PF17932) In PDB | Rhodococcus sp. USK13 | |
| 2 | B, D | DNA (5'-D(*TP*AP*GP*AP*TP*AP*CP*TP*CP*CP*GP*GP*AP*GP*TP*AP*TP*CP*TP*A)-3') | polymer | 20 | 6133.0 | 2 | Rhodococcus | ||
| 3 | A | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 4 | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A, F, G, T: 10 - 207 (UniProt: A0A2S8J6Y8)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Mse 1 | - | expression tag |
| Ser 2 | - | expression tag |
| Ala 3 | - | expression tag |
| Ser 4 | - | expression tag |
| Ala 5 | - | expression tag |
| Glu 6 | - | expression tag |
| Pro 7 | - | expression tag |
| Glu 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Val 92 | Ile 125 | conflict |
| Arg 140 | Gly 173 | conflict |
| Lys 187 | Glu 220 | conflict |
| Glu 188 | Asp 221 | conflict |
| Asp 191 | Asn 224 | conflict |
| Leu 199 | Ile 232 | conflict |
| Gly 205 | Ala 238 | conflict |
| Ala 208 | - | expression tag |
| Asp 209 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 107257.2 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 95.0 | |
| All* | Total formula weight | 107352.1 |
