8SQK
SARS-CoV-2 replication-transcription complex bound to RNA-nsp9 and GDP-betaS, as a pre-catalytic deRNAylation/mRNA capping intermediate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | RNA-directed RNA polymerase nsp12 | polymer | 929 | 106440.6 | 1 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) | Severe acute respiratory syndrome coronavirus 2 | Pol,RdRp,Non-structural protein 12,nsp12 |
| 2 | B, D (B, D) | Non-structural protein 8 | polymer | 198 | 21903.0 | 2 | UniProt (P0DTD1) Pfam (PF08717) | Severe acute respiratory syndrome coronavirus 2 | nsp8 |
| 3 | C (C) | Non-structural protein 7 | polymer | 83 | 9248.8 | 1 | UniProt (P0DTD1) Pfam (PF08716) | Severe acute respiratory syndrome coronavirus 2 | nsp7 |
| 4 | E (G) | Non-structural protein 9 | polymer | 113 | 12391.2 | 1 | UniProt (P0DTD1) Pfam (PF08710) | Severe acute respiratory syndrome coronavirus 2 | nsp9 |
| 5 | F (P) | Primer RNA | polymer | 32 | 10200.1 | 1 | Severe acute respiratory syndrome coronavirus | ||
| 6 | G (T) | Template RNA | polymer | 35 | 11254.7 | 1 | Severe acute respiratory syndrome coronavirus | ||
| 7 | H (O) | SARS-CoV-2 5' UTR | polymer | 20 | 6290.7 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
| 8 | I, J (A) | 5'-O-[(R)-hydroxy(thiophosphonooxy)phosphoryl]guanosine | non-polymer | 459.3 | 2 | Chemie (VSN) | |||
| 9 | K, L (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 10 | M (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 11 | N, O, P, Q, R... (A, B, C, P, T...) | water | water | 18.0 | 131 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 199632.2 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1073.7 | |
| All* | Total formula weight | 200705.8 |
