8SJ9
Crystal structure of the H1 hemagglutinin COBRA X6
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Hemagglutinin | polymer | 513 | 57564.4 | 3 | UniProt (A0A0G2RXV5) Pfam (PF00509) | Influenza A virus | |
| 2 | D, F, G (D, F, G) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
| 3 | E, H (E, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 4 | I, J, K, N, O... (A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 10 | Chemie (NAG) | |||
| 5 | L, R (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 6 | M (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) |
Sequence modifications
A, B, C: 0 - 504 (UniProt: A0A0G2RXV5)
| PDB | External Database | Details |
|---|---|---|
| Ala -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Thr -2 | - | expression tag |
| Asn -1 | - | expression tag |
| Lys 208 | Arg 225 | conflict |
| Leu 505 | - | expression tag |
| Val 506 | - | expression tag |
| Pro 507 | - | expression tag |
| Arg 508 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 172693.1 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2608.4 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 2428.3 | |
| All* | Total formula weight | 177729.8 |
