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8S9B

Cryo-EM structure of Nav1.7 with LCM

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Sodium channel protein type 9 subunit alphapolymer1988226620.01UniProt (Q15858)
Pfam (PF00520)
Pfam (PF11933)
Pfam (PF06512)
Pfam (PF08016)
Homo sapiens (human)Neuroendocrine sodium channel,hNE-Na,Peripheral sodium channel 1,PN1,Sodium channel protein type IX subunit alpha,Voltage-gated sodium channel subunit alpha Nav1.7
2B
(B)
Sodium channel subunit beta-1polymer21824732.11UniProt (Q07699)
Pfam (PF07686)
Homo sapiens (human)
3C
(C)
Sodium channel subunit beta-2polymer21524355.91UniProt (O60939)
Pfam (PF07686)
Homo sapiens (human)
4D, E, F
(D, E, F)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
5AA, BA, CA, G
(B, A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
6H, I
(A)
lacosamidenon-polymer250.32Chemie (LQO)
7J, Q
(A)
O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serinenon-polymer792.12Chemie (P5S)
8K, L, M, Z
(A)
CHOLESTEROL HEMISUCCINATEnon-polymer486.74Chemie (Y01)
9N, O, S, T, U...
(A)
1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer510.78Chemie (LPE)
10P, R, Y
(A)
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer787.13Chemie (PCW)
11DA, EA
(A, B)
waterwater18.030Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight275708.0
BranchedNumber of molecules3
Total formula weight1273.2
Non-Polymers*Number of molecules23
Total formula weight11363.5
All*Total formula weight288344.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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