8S8Q
Structure of the Interfilum paradoxum LFY DNA-binding domain bound to DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, B) | Floricaula/leafy-like transcription factor | polymer | 162 | 18708.5 | 2 | UniProt (A0A1Y1IRK2) Pfam (PF17538) | Interfilum paradoxum | |
| 2 | B (D) | DNA (5'-D(P*GP*GP*TP*GP*CP*AP*GP*CP*GP*AP*CP*CP*GP*GP*TP*AP*GP*CP*AP*AP*CP*GP*CP*A)-3') | polymer | 24 | 7429.8 | 1 | Interfilum paradoxum | ||
| 3 | D (C) | DNA (5'-D(P*TP*GP*CP*GP*TP*TP*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*GP*CP*TP*GP*CP*AP*CP*T)-3') | polymer | 24 | 7328.7 | 1 | Interfilum paradoxum | ||
| 4 | E, F, G, H (A, D, B, C) | water | water | 18.0 | 30 | Chemie (HOH) |
Sequence modifications
A, B: 189 - 349 (UniProt: A0A1Y1IRK2)
| PDB | External Database | Details |
|---|---|---|
| Gln 215 | Glu 252 | conflict |
| Glu 218 | Gly 255 | conflict |
| Thr 232 | Lys 269 | conflict |
| Lys 234 | Thr 271 | conflict |
| Pro 240 | Ala 277 | conflict |
| Ala 286 | Thr 323 | conflict |
| Lys 290 | Arg 327 | conflict |
| Ser 291 | Lys 328 | conflict |
| Gln 322 | Leu 359 | conflict |
| His 325 | Gln 362 | conflict |
| Met 338 | Leu 375 | conflict |
| Gln 348 | - | insertion |
| Leu 350 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 52175.6 | |
| All* | Total formula weight | 52175.6 |
