8S8Q
Structure of the Interfilum paradoxum LFY DNA-binding domain bound to DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-01 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8734 |
Spacegroup name | P 61 |
Unit cell lengths | 144.890, 144.890, 69.836 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.430 - 2.950 |
R-factor | 0.19587 |
Rwork | 0.194 |
R-free | 0.23693 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.714 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.430 | 47.300 | 2.790 |
High resolution limit [Å] | 2.720 | 12.170 | 2.720 |
Rmerge | 0.148 | 0.025 | 3.375 |
Rmeas | 0.159 | 0.027 | 3.776 |
Number of reflections | 22512 | 274 | 1588 |
<I/σ(I)> | 9.26 | ||
Completeness [%] | 99.5 | ||
Redundancy | 7 | ||
CC(1/2) | 0.999 | 1.000 | 0.095 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | PEG 8000 30%, 10mM magnesium acetate |