8RYI
Metformin hydrolase from Aminobacter niigataensis MD1 with urea in the active site
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, A, F, D | Arginase family protein | polymer | 348 | 38024.3 | 4 | UniProt (A0A9E9PPA5) In PDB | Aminobacter niigataensis | |
2 | B, E | Agmatinase family protein | polymer | 376 | 42140.6 | 2 | UniProt (A0A9E9PQ69) In PDB | Aminobacter niigataensis | |
3 | B, E | dicarbonimidic diamide | non-polymer | 103.1 | 2 | Chemie (C5J) | |||
4 | B, E | UREA | non-polymer | 60.1 | 2 | Chemie (URE) | |||
5 | B, E | NICKEL (II) ION | non-polymer | 58.7 | 4 | Chemie (NI) | |||
6 | E | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
7 | water | water | 18.0 | 928 | Chemie (HOH) |
Sequence modifications
B, E: 1 - 357 (UniProt: A0A9E9PQ69)
PDB | External Database | Details |
---|---|---|
Met -18 | - | initiating methionine |
Ala -17 | - | expression tag |
Trp -16 | - | expression tag |
Ser -15 | - | expression tag |
His -14 | - | expression tag |
Pro -13 | - | expression tag |
Gln -12 | - | expression tag |
Phe -11 | - | expression tag |
Glu -10 | - | expression tag |
Lys -9 | - | expression tag |
Val -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Asp 324 | Tyr 324 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 236378.4 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 601.1 | |
All* | Total formula weight | 236979.5 |