8RQ2
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | Large ribosomal subunit protein bL32 | polymer | 56 | 6332.2 | 1 | UniProt (P0A7N4) Pfam (PF01783) | Escherichia coli | 50S ribosomal protein L32 |
| 2 | B (1) | Large ribosomal subunit protein bL33 | polymer | 50 | 5814.8 | 1 | UniProt (P0A7N9) Pfam (PF00471) | Escherichia coli | 50S ribosomal protein L33 |
| 3 | C (2) | Large ribosomal subunit protein bL34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) | Escherichia coli | 50S ribosomal protein L34 |
| 4 | D (3) | Large ribosomal subunit protein bL35 | polymer | 64 | 7181.8 | 1 | UniProt (P0A7Q1) Pfam (PF01632) | Escherichia coli | 50S ribosomal protein L35,Ribosomal protein A |
| 5 | E (4) | Large ribosomal subunit protein bL36A | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) | Escherichia coli | 50S ribosomal protein L36,Ribosomal protein B |
| 6 | F (6) | Large ribosomal subunit protein bL31 | polymer | 66 | 7516.7 | 1 | UniProt (P0A7M9) Pfam (PF01197) | Escherichia coli | 50S ribosomal protein L31 |
| 7 | G (A) | 23S ribosomal RNA | polymer | 2903 | 941321.3 | 1 | Escherichia coli | ||
| 8 | H (B) | 5S ribosomal RNA | polymer | 120 | 38813.1 | 1 | Escherichia coli | ||
| 9 | I (C) | Large ribosomal subunit protein uL2 | polymer | 271 | 29663.2 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | 50S ribosomal protein L2 |
| 10 | J (D) | Large ribosomal subunit protein uL3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli | 50S ribosomal protein L3 |
| 11 | K (E) | Large ribosomal subunit protein uL4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli | 50S ribosomal protein L4 |
| 12 | L (F) | Large ribosomal subunit protein uL5 | polymer | 177 | 20073.2 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli | 50S ribosomal protein L5 |
| 13 | M (G) | Large ribosomal subunit protein uL6 | polymer | 176 | 18801.6 | 1 | UniProt (P0AG55) Pfam (PF00347) | Escherichia coli | 50S ribosomal protein L6 |
| 14 | N (H) | Large ribosomal subunit protein bL9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) | Escherichia coli | 50S ribosomal protein L9 |
| 15 | O (J) | Large ribosomal subunit protein uL13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli | 50S ribosomal protein L13 |
| 16 | P (K) | Large ribosomal subunit protein uL14 | polymer | 122 | 13451.9 | 1 | UniProt (P0ADY3) Pfam (PF00238) | Escherichia coli | 50S ribosomal protein L14 |
| 17 | Q (L) | Large ribosomal subunit protein uL15 | polymer | 143 | 14877.3 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli | 50S ribosomal protein L15 |
| 18 | R (M) | Large ribosomal subunit protein uL16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) | Escherichia coli | 50S ribosomal protein L16 |
| 19 | S (N) | Large ribosomal subunit protein bL17 | polymer | 120 | 13721.9 | 1 | UniProt (P0AG44) Pfam (PF01196) | Escherichia coli | 50S ribosomal protein L17 |
| 20 | T (O) | Large ribosomal subunit protein uL18 | polymer | 116 | 12663.5 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli | 50S ribosomal protein L18 |
| 21 | U (P) | Large ribosomal subunit protein bL19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) | Escherichia coli | 50S ribosomal protein L19 |
| 22 | V (Q) | Large ribosomal subunit protein bL20 | polymer | 117 | 13396.8 | 1 | UniProt (P0A7L3) Pfam (PF00453) | Escherichia coli | 50S ribosomal protein L20 |
| 23 | W (R) | Large ribosomal subunit protein bL21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) Pfam (PF00829) | Escherichia coli | 50S ribosomal protein L21 |
| 24 | X (S) | Large ribosomal subunit protein uL22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli | 50S ribosomal protein L22 |
| 25 | Y (T) | Large ribosomal subunit protein uL23 | polymer | 93 | 10546.5 | 1 | UniProt (P0ADZ0) Pfam (PF00276) | Escherichia coli | 50S ribosomal protein L23 |
| 26 | Z (U) | Large ribosomal subunit protein uL24 | polymer | 102 | 11078.9 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) | Escherichia coli | 50S ribosomal protein L24 |
| 27 | AA (V) | Large ribosomal subunit protein bL25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | 50S ribosomal protein L25 |
| 28 | BA (W) | Large ribosomal subunit protein bL27 | polymer | 75 | 8174.4 | 1 | UniProt (P0A7L8) Pfam (PF01016) | Escherichia coli | 50S ribosomal protein L27 |
| 29 | CA (X) | Large ribosomal subunit protein bL28 | polymer | 77 | 8896.4 | 1 | UniProt (P0A7M2) Pfam (PF00830) | Escherichia coli | 50S ribosomal protein L28 |
| 30 | DA (Y) | Large ribosomal subunit protein uL29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) Pfam (PF00831) | Escherichia coli | 50S ribosomal protein L29 |
| 31 | EA (Z) | Large ribosomal subunit protein uL30 | polymer | 58 | 6423.6 | 1 | UniProt (P0AG51) Pfam (PF00327) | Escherichia coli | 50S ribosomal protein L30 |
| 32 | FA, GA, HA (x, y, z) | Apidaecins type 88 | polymer | 18 | 2082.5 | 3 | Pfam (PF00807) UniProt (by SIFTS) (Q06602) | Apis mellifera | Api88 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 34 |
| Total formula weight | 1351190.2 | |
| All* | Total formula weight | 1351190.2 |
