8R8K
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Spike glycoprotein | polymer | 1285 | 142729.3 | 1 | UniProt (A0A7L9WCR1) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
2 | H | XBB-4 Fab Heavy chain | polymer | 233 | 24755.7 | 1 | Homo sapiens | ||
3 | L | XBB-4 Fab Light chain | polymer | 214 | 23185.8 | 1 | Homo sapiens |
Sequence modifications
A: 1 - 1205 (UniProt: A0A7L9WCR1)
PDB | External Database | Details |
---|---|---|
Ile 19 | Thr 19 | conflict |
- | Leu 24 | deletion |
- | Pro 25 | deletion |
- | Pro 26 | deletion |
Ser 24 | Ala 27 | conflict |
Asp 139 | Gly 142 | conflict |
Gly 210 | Val 213 | conflict |
Asp 336 | Gly 339 | conflict |
Phe 368 | Ser 371 | conflict |
Pro 370 | Ser 373 | conflict |
Phe 372 | Ser 375 | conflict |
Ala 373 | Thr 376 | conflict |
Asn 402 | Asp 405 | conflict |
Ser 405 | Arg 408 | conflict |
Asn 414 | Lys 417 | conflict |
Lys 437 | Asn 440 | conflict |
Gln 449 | Leu 452 | conflict |
Asn 474 | Ser 477 | conflict |
Lys 475 | Thr 478 | conflict |
Ala 481 | Glu 484 | conflict |
Arg 490 | Gln 493 | conflict |
Arg 495 | Gln 498 | conflict |
Tyr 498 | Asn 501 | conflict |
His 502 | Tyr 505 | conflict |
Tyr 652 | His 655 | conflict |
Lys 676 | Asn 679 | conflict |
Leu 701 | Ser 704 | conflict |
Lys 761 | Asn 764 | conflict |
Tyr 793 | Asp 796 | conflict |
His 951 | Gln 954 | conflict |
Lys 966 | Asn 969 | conflict |
Gly 1206 | - | expression tag |
Ser 1207 | - | expression tag |
Gly 1208 | - | expression tag |
Tyr 1209 | - | expression tag |
Ile 1210 | - | expression tag |
Pro 1211 | - | expression tag |
Glu 1212 | - | expression tag |
Ala 1213 | - | expression tag |
Pro 1214 | - | expression tag |
Arg 1215 | - | expression tag |
Asp 1216 | - | expression tag |
Gly 1217 | - | expression tag |
Gln 1218 | - | expression tag |
Ala 1219 | - | expression tag |
Tyr 1220 | - | expression tag |
Val 1221 | - | expression tag |
Arg 1222 | - | expression tag |
Lys 1223 | - | expression tag |
Asp 1224 | - | expression tag |
Gly 1225 | - | expression tag |
Glu 1226 | - | expression tag |
Trp 1227 | - | expression tag |
Val 1228 | - | expression tag |
Leu 1229 | - | expression tag |
Leu 1230 | - | expression tag |
Ser 1231 | - | expression tag |
Thr 1232 | - | expression tag |
Phe 1233 | - | expression tag |
Leu 1234 | - | expression tag |
Gly 1235 | - | expression tag |
Arg 1236 | - | expression tag |
Ser 1237 | - | expression tag |
Leu 1238 | - | expression tag |
Glu 1239 | - | expression tag |
Val 1240 | - | expression tag |
Leu 1241 | - | expression tag |
Phe 1242 | - | expression tag |
Gln 1243 | - | expression tag |
Gly 1244 | - | expression tag |
Pro 1245 | - | expression tag |
Gly 1246 | - | expression tag |
His 1247 | - | expression tag |
His 1248 | - | expression tag |
His 1249 | - | expression tag |
His 1250 | - | expression tag |
His 1251 | - | expression tag |
His 1252 | - | expression tag |
His 1253 | - | expression tag |
His 1254 | - | expression tag |
Gly 1255 | - | expression tag |
Ser 1256 | - | expression tag |
Ala 1257 | - | expression tag |
Trp 1258 | - | expression tag |
Ser 1259 | - | expression tag |
His 1260 | - | expression tag |
Pro 1261 | - | expression tag |
Gln 1262 | - | expression tag |
Phe 1263 | - | expression tag |
Glu 1264 | - | expression tag |
Lys 1265 | - | expression tag |
Gly 1266 | - | expression tag |
Gly 1267 | - | expression tag |
Gly 1268 | - | expression tag |
Ser 1269 | - | expression tag |
Gly 1270 | - | expression tag |
Gly 1271 | - | expression tag |
Gly 1272 | - | expression tag |
Ser 1273 | - | expression tag |
Gly 1274 | - | expression tag |
Gly 1275 | - | expression tag |
Ser 1276 | - | expression tag |
Ala 1277 | - | expression tag |
Trp 1278 | - | expression tag |
Ser 1279 | - | expression tag |
His 1280 | - | expression tag |
Pro 1281 | - | expression tag |
Gln 1282 | - | expression tag |
Phe 1283 | - | expression tag |
Glu 1284 | - | expression tag |
Lys 1285 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 190670.7 | |
All* | Total formula weight | 190670.7 |