8QU1
mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S ribosomal RNA | polymer | 1559 | 500019.6 | 1 | GenBank (1025814679) | Homo sapiens (human) | |
| 2 | B (B) | mitochondrial tRNAVal | polymer | 69 | 22022.1 | 1 | GenBank (1485738021) | Homo sapiens (human) | |
| 3 | C (D) | 39S ribosomal protein L2, mitochondrial | polymer | 305 | 33355.9 | 1 | UniProt (Q5T653) Pfam (PF00181) Pfam (PF03947) | Homo sapiens (human) | L2mt,MRP-L2,Mitochondrial large ribosomal subunit protein uL2m |
| 4 | D (E) | 39S ribosomal protein L3, mitochondrial | polymer | 348 | 38689.6 | 1 | UniProt (P09001) Pfam (PF00297) | Homo sapiens (human) | L3mt,MRP-L3,Mitochondrial large ribosomal subunit protein uL3m |
| 5 | E (F) | 39S ribosomal protein L4, mitochondrial | polymer | 311 | 34970.2 | 1 | UniProt (Q9BYD3) Pfam (PF00573) | Homo sapiens (human) | L4mt,MRP-L4,Mitochondrial large ribosomal subunit protein uL4m |
| 6 | F (H) | 39S ribosomal protein L9, mitochondrial | polymer | 267 | 30296.4 | 1 | UniProt (Q9BYD2) Pfam (PF01281) Pfam (PF22078) | Homo sapiens (human) | L9mt,MRP-L9,Mitochondrial large ribosomal subunit protein bL9m |
| 7 | G (I) | 39S ribosomal protein L10, mitochondrial | polymer | 261 | 29322.5 | 1 | UniProt (Q7Z7H8) Pfam (PF00466) | Homo sapiens (human) | L10mt,MRP-L10,39S ribosomal protein L8,mitochondrial,L8mt,MRP-L8,Mitochondrial large ribosomal subunit protein uL10m |
| 8 | H (J) | 39S ribosomal protein L11, mitochondrial | polymer | 192 | 20716.2 | 1 | UniProt (Q9Y3B7) Pfam (PF03946) Pfam (PF00298) | Homo sapiens (human) | L11mt,MRP-L11,Mitochondrial large ribosomal subunit protein uL11m |
| 9 | I (K) | 39S ribosomal protein L13, mitochondrial | polymer | 178 | 20723.0 | 1 | UniProt (Q9BYD1) Pfam (PF00572) | Homo sapiens (human) | MRP-L13,Mitochondrial large ribosomal subunit protein uL13m |
| 10 | J (L) | 39S ribosomal protein L14, mitochondrial | polymer | 145 | 15973.7 | 1 | UniProt (Q6P1L8) Pfam (PF00238) | Homo sapiens (human) | L14mt,MRP-L14,39S ribosomal protein L32,mitochondrial,L32mt,MRP-L32,Mitochondrial large ribosomal subunit protein uL14m |
| 11 | K (M) | 39S ribosomal protein L15, mitochondrial | polymer | 296 | 33473.8 | 1 | UniProt (Q9P015) Pfam (PF00828) | Homo sapiens (human) | L15mt,MRP-L15,Mitochondrial large ribosomal subunit protein uL15m |
| 12 | L (N) | 39S ribosomal protein L16, mitochondrial | polymer | 251 | 28496.3 | 1 | UniProt (Q9NX20) Pfam (PF00252) | Homo sapiens (human) | L16mt,MRP-L16,Mitochondrial large ribosomal subunit protein uL16m |
| 13 | M (O) | 39S ribosomal protein L17, mitochondrial | polymer | 175 | 20083.3 | 1 | UniProt (Q9NRX2) Pfam (PF01196) | Homo sapiens (human) | L17mt,MRP-L17,LYST-interacting protein 2,Mitochondrial large ribosomal subunit protein bL17m |
| 14 | N (P) | 39S ribosomal protein L18, mitochondrial | polymer | 180 | 20607.6 | 1 | UniProt (Q9H0U6) Pfam (PF00861) | Homo sapiens (human) | L18mt,MRP-L18,Mitochondrial large ribosomal subunit protein uL18m |
| 15 | O (Q) | 39S ribosomal protein L19, mitochondrial | polymer | 292 | 33585.0 | 1 | UniProt (P49406) Pfam (PF01245) | Homo sapiens (human) | L19mt,MRP-L19,39S ribosomal protein L15,mitochondrial,L15mt,MRP-L15,Mitochondrial large ribosomal subunit protein bL19m |
| 16 | P (R) | 39S ribosomal protein L20, mitochondrial | polymer | 149 | 17479.7 | 1 | UniProt (Q9BYC9) Pfam (PF00453) | Homo sapiens (human) | L20mt,MRP-L20,Mitochondrial large ribosomal subunit protein bL20m |
| 17 | Q (S) | 39S ribosomal protein L21, mitochondrial | polymer | 205 | 22847.7 | 1 | UniProt (Q7Z2W9) Pfam (PF00829) | Homo sapiens (human) | L21mt,MRP-L21,Mitochondrial large ribosomal subunit protein bL21m |
| 18 | R (T) | 39S ribosomal protein L22, mitochondrial | polymer | 206 | 23683.7 | 1 | UniProt (Q9NWU5) Pfam (PF00237) | Homo sapiens (human) | L22mt,MRP-L22,39S ribosomal protein L25,mitochondrial,L25mt,MRP-L25,Mitochondrial large ribosomal subunit protein uL22m |
| 19 | S (U) | 39S ribosomal protein L23, mitochondrial | polymer | 153 | 17807.2 | 1 | UniProt (Q16540) Pfam (PF00276) | Homo sapiens (human) | MRP-L23,L23 mitochondrial-related protein,Mitochondrial large ribosomal subunit protein uL23m,Ribosomal protein L23-like |
| 20 | T (V) | 39S ribosomal protein L24, mitochondrial | polymer | 216 | 24953.9 | 1 | UniProt (Q96A35) Pfam (PF00467) Pfam (PF17136) | Homo sapiens (human) | L24mt,MRP-L24,Mitochondrial large ribosomal subunit protein uL24m |
| 21 | U (W) | 39S ribosomal protein L27, mitochondrial | polymer | 148 | 16102.9 | 1 | UniProt (Q9P0M9) Pfam (PF01016) | Homo sapiens (human) | L27mt,MRP-L27,Mitochondrial large ribosomal subunit protein bL27m |
| 22 | V (X) | 39S ribosomal protein L28, mitochondrial | polymer | 256 | 30202.9 | 1 | UniProt (Q13084) Pfam (PF00830) | Homo sapiens (human) | L28mt,MRP-L28,Melanoma antigen p15,Melanoma-associated antigen recognized by T-lymphocytes,Mitochondrial large ribosomal subunit protein bL28m |
| 23 | W (Y) | 39S ribosomal protein L47, mitochondrial | polymer | 250 | 29508.5 | 1 | UniProt (Q9HD33) Pfam (PF06984) | Homo sapiens (human) | L47mt,MRP-L47,Mitochondrial large ribosomal subunit protein uL29m,Nasopharyngeal carcinoma metastasis-related protein 1 |
| 24 | X (Z) | 39S ribosomal protein L30, mitochondrial | polymer | 161 | 18582.8 | 1 | UniProt (Q8TCC3) Pfam (PF00327) | Homo sapiens (human) | L30mt,MRP-L30,39S ribosomal protein L28,mitochondrial,L28mt,MRP-L28,Mitochondrial large ribosomal subunit protein uL30m |
| 25 | Y (0) | 39S ribosomal protein L32, mitochondrial | polymer | 188 | 21437.8 | 1 | UniProt (Q9BYC8) Pfam (PF01783) | Homo sapiens (human) | L32mt,MRP-L32,Mitochondrial large ribosomal subunit protein bL32m |
| 26 | Z (1) | 39S ribosomal protein L33, mitochondrial | polymer | 65 | 7635.2 | 1 | UniProt (O75394) Pfam (PF00471) | Homo sapiens (human) | L33mt,MRP-L33,Mitochondrial large ribosomal subunit protein bL33m |
| 27 | AA (2) | 39S ribosomal protein L34, mitochondrial | polymer | 92 | 10183.9 | 1 | UniProt (Q9BQ48) Pfam (PF00468) | Homo sapiens (human) | L34mt,MRP-L34,Mitochondrial large ribosomal subunit protein bL34m |
| 28 | BA (3) | 39S ribosomal protein L35, mitochondrial | polymer | 188 | 21558.5 | 1 | UniProt (Q9NZE8) Pfam (PF01632) | Homo sapiens (human) | L35mt,MRP-L35,Mitochondrial large ribosomal subunit protein bL35m |
| 29 | CA (5) | 39S ribosomal protein L37, mitochondrial | polymer | 423 | 48183.3 | 1 | UniProt (Q9BZE1) Pfam (PF07147) | Homo sapiens (human) | L37mt,MRP-L37,39S ribosomal protein L2,mitochondrial,L2mt,MRP-L2,Mitochondrial large ribosomal subunit protein mL37 |
| 30 | DA (6) | 39S ribosomal protein L38, mitochondrial | polymer | 380 | 44659.4 | 1 | UniProt (Q96DV4) Pfam (PF01161) | Homo sapiens (human) | L38mt,MRP-L38,Mitochondrial large ribosomal subunit protein mL38 |
Sequence modifications
A: 1671 - 3229 (GenBank: 1025814679)
| PDB | External Database | Details |
|---|---|---|
| U 3107 | Unk 3109 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 30 |
| Total formula weight | 1237162.5 | |
| All* | Total formula weight | 1237162.5 |
