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8QH9

X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with a S-29b

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Histone deacetylase 6polymer35939899.11UniProt (F8W4B7)
Pfam (PF00850)
Danio rerio (zebrafish)
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D
(A)
POTASSIUM IONnon-polymer39.12Chemie (K)
PubChem (813)
4E
(A)
Marbostat 200non-polymer547.61Chemie (V9F)
PubChem (177379343)
PubChem (177379344)
PubChem (171905182)
5F, G
(A)
THIOCYANATE IONnon-polymer58.12Chemie (SCN)
PubChem (9322)
6H
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
7I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
PubChem (8117)
8J
(A)
waterwater18.0331Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39899.1
Non-Polymers*Number of molecules8
Total formula weight975.6
All*Total formula weight40874.7
*Water molecules are not included.

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PDB entries from 2026-04-08

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