8QBY
Respiratory complex I from Paracoccus denitrificans in MSP2N2 nanodiscs
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | K | NADH-quinone oxidoreductase subunit K | polymer | 101 | 10863.1 | 1 | UniProt (A1B482) Pfam (PF00420) In PDB | Paracoccus denitrificans PD1222 | NADH dehydrogenase I subunit K,NADH dehydrogenase I,subunit 11,NADH-quinone oxidoreductase subunit 11,NQO11,NDH-1 subunit K,NDH-1 |
2 | G | NADH-quinone oxidoreductase | polymer | 674 | 73289.4 | 1 | UniProt (A1B489) Pfam (PF13510) Pfam (PF10588) Pfam (PF22117) Pfam (PF22151) Pfam (PF00384) Pfam (PF09326) In PDB | Paracoccus denitrificans PD1222 | |
3 | t | Protein-L-isoaspartate O-methyltransferase | polymer | 217 | 23528.9 | 1 | UniProt (A1B5L6) Pfam (PF01135) In PDB | Paracoccus denitrificans PD1222 | |
4 | I | NADH-quinone oxidoreductase subunit I | polymer | 163 | 18925.6 | 1 | UniProt (A1B486) Pfam (PF12838) In PDB | Paracoccus denitrificans PD1222 | |
5 | E | NADH dehydrogenase subunit E | polymer | 239 | 26145.9 | 1 | UniProt (A1B494) Pfam (PF01257) In PDB | Paracoccus denitrificans PD1222 | |
6 | N | NADH-quinone oxidoreductase subunit N | polymer | 499 | 52564.8 | 1 | UniProt (A1B479) Pfam (PF00361) In PDB | Paracoccus denitrificans PD1222 | |
7 | H | NADH-quinone oxidoreductase subunit H | polymer | 345 | 38861.2 | 1 | UniProt (A1B487) Pfam (PF00146) In PDB | Paracoccus denitrificans PD1222 | |
8 | F | NADH-quinone oxidoreductase subunit F | polymer | 431 | 47281.1 | 1 | UniProt (A1B491) Pfam (PF01512) Pfam (PF22461) Pfam (PF10531) Pfam (PF10589) In PDB | Paracoccus denitrificans PD1222 | |
9 | D | NADH-quinone oxidoreductase subunit D | polymer | 412 | 46811.5 | 1 | UniProt (A1B495) Pfam (PF00346) In PDB | Paracoccus denitrificans PD1222 | |
10 | q | NADH:ubiquinone oxidoreductase 17.2 kD subunit | polymer | 124 | 14432.9 | 1 | UniProt (A1B1H8) Pfam (PF05071) In PDB | Paracoccus denitrificans PD1222 | |
11 | A | NADH-quinone oxidoreductase subunit A | polymer | 121 | 13686.1 | 1 | UniProt (A1B498) Pfam (PF00507) In PDB | Paracoccus denitrificans PD1222 | |
12 | J | NADH-quinone oxidoreductase chain 10 | polymer | 200 | 21835.2 | 1 | UniProt (P29922) Pfam (PF00499) In PDB | Paracoccus denitrificans PD1222 | |
13 | R | Zinc finger CHCC-type domain-containing protein | polymer | 62 | 7069.9 | 1 | UniProt (A1B357) Pfam (PF10276) In PDB | Paracoccus denitrificans PD1222 | |
14 | Q | ETC complex I subunit conserved region | polymer | 103 | 12048.4 | 1 | UniProt (A1B1M0) Pfam (PF04800) In PDB | Paracoccus denitrificans PD1222 | |
15 | C | NADH-quinone oxidoreductase subunit C | polymer | 208 | 23920.1 | 1 | UniProt (A1B496) Pfam (PF00329) In PDB | Paracoccus denitrificans PD1222 | |
16 | B | NADH-quinone oxidoreductase subunit B | polymer | 175 | 19525.5 | 1 | UniProt (A1B497) Pfam (PF01058) In PDB | Paracoccus denitrificans PD1222 | |
17 | L | NADH dehydrogenase subunit L | polymer | 703 | 77811.4 | 1 | UniProt (A1B481) Pfam (PF00662) Pfam (PF00361) In PDB | Paracoccus denitrificans PD1222 | |
18 | M | NADH dehydrogenase subunit M | polymer | 513 | 56519.9 | 1 | UniProt (A1B480) Pfam (PF00361) In PDB | Paracoccus denitrificans PD1222 | |
19 | F, G, I, B | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
20 | E, G | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
21 | G | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
22 | L, N, M, H, A... | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | non-polymer | 705.0 | 17 | Chemie (3PH) | |||
23 | L, I | O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine | non-polymer | 792.1 | 2 | Chemie (P5S) | |||
24 | I, N, M, D | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
25 | N, L, M, H, q | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 10 | Chemie (3PE) | |||
26 | H, M | CARDIOLIPIN | non-polymer | 1464.0 | 2 | Chemie (CDL) | |||
27 | F | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) | |||
28 | D, J | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 2 | Chemie (PC1) | |||
29 | R | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
30 | B | UBIQUINONE-10 | non-polymer | 863.3 | 1 | Chemie (U10) | |||
31 | water | water | 18.0 | 1080 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 18 |
Total formula weight | 585120.8 | |
Non-Polymers* | Number of molecules | 49 |
Total formula weight | 29588.0 | |
All* | Total formula weight | 614708.8 |