8Q94
Crystal structure of The SARS-COV-2 BA.2.75 RBD with neutralizing-VHHs Re32D03 and Ma3B12
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike protein S1 | polymer | 187 | 21316.9 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | |
| 2 | B (B) | Nanobody Ma3B12 | polymer | 131 | 14308.7 | 1 | Vicugna pacos | ||
| 3 | C (C) | Nanobody Re32D03 | polymer | 132 | 14101.8 | 1 | Vicugna pacos | ||
| 4 | D, E, F (A, B, C) | water | water | 18.0 | 28 | Chemie (HOH) |
Sequence modifications
A: 334 - 517 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Glu 331 | - | expression tag |
| Gly 332 | - | expression tag |
| Ser 333 | - | expression tag |
| Asp 339 | Gly 339 | variant |
| Asp 343 | Asn 343 | conflict |
| Leu 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Ser 391 | Cys 391 | conflict |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| Ser 446 | Gly 446 | variant |
| Asn 477 | Ser 477 | variant |
| Lys 478 | Thr 478 | variant |
| Ala 484 | Glu 484 | variant |
| Arg 498 | Gln 498 | variant |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 49727.4 | |
| All* | Total formula weight | 49727.4 |






