8Q94
Crystal structure of The SARS-COV-2 BA.2.75 RBD with neutralizing-VHHs Re32D03 and Ma3B12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-09 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 67.159, 67.159, 224.897 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.490 - 2.500 |
R-factor | 0.2224 |
Rwork | 0.220 |
R-free | 0.27700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.461 |
Data reduction software | XDS |
Data scaling software | pointless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.490 | 2.589 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.150 | 1.672 |
Rpim | 0.029 | 0.316 |
Number of reflections | 485338 | 1809 |
<I/σ(I)> | 21.15 | 3.13 |
Completeness [%] | 99.8 | 99.83 |
Redundancy | 26 | 27.4 |
CC(1/2) | 0.999 | 0.992 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7 | 293 | 0.1 M HEPES pH 7.0, 18% PEG 12000 |