8Q6R
Structure of complement FP in complex with the TPP-3077 VHH
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | The properdin specific VHH TPP-3077 | polymer | 125 | 13804.4 | 2 | Lama glama | ||
2 | C, E (C, E) | Properdin | polymer | 108 | 11831.3 | 2 | UniProt (P27918) Pfam (PF18487) Pfam (PF00090) | Homo sapiens (human) | |
3 | D, F (D, F) | Properdin | polymer | 221 | 24758.2 | 2 | UniProt (P27918) Pfam (PF00090) Pfam (PF22195) | Homo sapiens (human) | |
4 | G, H, J, K (G, H, J, K) | beta-D-glucopyranose-(1-3)-alpha-L-fucopyranose | branched | 326.3 | 4 | In PDB GlyTouCan (G36855WW) | |||
5 | I (I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
6 | L, M (A) | GLYCOCHOLIC ACID | non-polymer | 465.6 | 2 | Chemie (GCH) | |||
7 | AA, BA, CA, EA, FA... (F, C, D, E) | alpha-D-mannopyranose | non-polymer | 180.2 | 20 | Chemie (MAN) | |||
8 | DA (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
9 | IA, JA, KA, LA, MA... (A, B, C, D, E...) | water | water | 18.0 | 364 | Chemie (HOH) |
Sequence modifications
C, E: 28 - 135 (UniProt: P27918)
D, F: 256 - 469 (UniProt: P27918)
PDB | External Database | Details |
---|---|---|
Ala 132 | Cys 132 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 255 | - | expression tag |
His 470 | - | expression tag |
His 471 | - | expression tag |
His 472 | - | expression tag |
His 473 | - | expression tag |
His 474 | - | expression tag |
His 475 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 100787.8 | |
Branched | Number of molecules | 5 |
Total formula weight | 1729.6 | |
Non-Polymers* | Number of molecules | 23 |
Total formula weight | 4755.6 | |
All* | Total formula weight | 107272.9 |