8Q1B
III2-IV1 respiratory supercomplex from S. pombe
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, K (A, L) | Probable mitochondrial-processing peptidase subunit beta | polymer | 457 | 50802.3 | 2 | UniProt (Q9P7X1) Pfam (PF00675) Pfam (PF05193) | Schizosaccharomyces pombe (fission yeast) | |
| 2 | B, L (B, M) | Cytochrome b-c1 complex subunit 2, mitochondrial | polymer | 426 | 45705.0 | 2 | UniProt (P78761) Pfam (PF00675) Pfam (PF05193) | Schizosaccharomyces pombe (fission yeast) | |
| 3 | C, M (C, N) | Cytochrome b | polymer | 387 | 43760.6 | 2 | UniProt (P05501) Pfam (PF00033) Pfam (PF00032) | Schizosaccharomyces pombe (fission yeast) | |
| 4 | D, N (D, O) | Cytochrome c1, heme protein, mitochondrial | polymer | 307 | 34383.1 | 2 | UniProt (O59680) Pfam (PF02167) | Schizosaccharomyces pombe (fission yeast) | |
| 5 | E, O (E, P) | Cytochrome b-c1 complex subunit Rieske, mitochondrial | polymer | 228 | 24769.4 | 2 | UniProt (Q09154) Pfam (PF02921) Pfam (PF00355) | Schizosaccharomyces pombe (fission yeast) | |
| 6 | F, P (F, Q) | Cytochrome b-c1 complex subunit 6 | polymer | 214 | 24340.5 | 2 | UniProt (O42932) Pfam (PF02320) | Schizosaccharomyces pombe (fission yeast) | |
| 7 | G, Q (G, R) | Cytochrome b-c1 complex subunit 7 | polymer | 137 | 16058.5 | 2 | UniProt (O74533) Pfam (PF02271) | Schizosaccharomyces pombe (fission yeast) | |
| 8 | H, R (H, S) | Cytochrome b-c1 complex subunit 8 | polymer | 92 | 10481.1 | 2 | UniProt (P50523) Pfam (PF02939) | Schizosaccharomyces pombe (fission yeast) | |
| 9 | I, S (I, T) | Cytochrome b-c1 complex subunit 9 | polymer | 67 | 7807.6 | 2 | UniProt (O74433) Pfam (PF05365) | Schizosaccharomyces pombe (fission yeast) | |
| 10 | J, T (J, U) | Cytochrome b-c1 complex subunit 10 | polymer | 79 | 9136.8 | 2 | UniProt (Q9P7E0) Pfam (PF09796) | Schizosaccharomyces pombe (fission yeast) | |
| 11 | U (a) | Cytochrome c oxidase subunit 1 | polymer | 538 | 59607.7 | 1 | UniProt (P07657) Pfam (PF00115) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide I |
| 12 | V (b) | Cytochrome c oxidase subunit 2 | polymer | 248 | 28139.3 | 1 | UniProt (P21534) Pfam (PF02790) Pfam (PF00116) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide II |
| 13 | W (c) | Cytochrome c oxidase subunit 3 | polymer | 269 | 30432.1 | 1 | UniProt (P14575) Pfam (PF00510) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide III |
| 14 | X (d) | Cytochrome c oxidase subunit 4, mitochondrial | polymer | 159 | 17624.1 | 1 | UniProt (P79010) Pfam (PF01215) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide IV |
| 15 | Y (e) | Cytochrome c oxidase polypeptide 5, mitochondrial | polymer | 228 | 24933.3 | 1 | UniProt (O74988) Pfam (PF02936) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide V |
| 16 | Z (f) | Cytochrome c oxidase subunit 6, mitochondrial | polymer | 140 | 15958.2 | 1 | UniProt (Q9UTF6) Pfam (PF02284) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide VI |
| 17 | AA (g) | Cytochrome c oxidase subunit 7 | polymer | 59 | 6741.9 | 1 | UniProt (G2TRP5) Pfam (PF02238) | Schizosaccharomyces pombe (fission yeast) | |
| 18 | BA (h) | Cytochrome c oxidase polypeptide VIII, mitochondrial | polymer | 66 | 7512.8 | 1 | UniProt (Q9P4W1) Pfam (PF02935) | Schizosaccharomyces pombe (fission yeast) | |
| 19 | CA (i) | Cytochrome c oxidase subunit 9, mitochondrial | polymer | 58 | 6652.8 | 1 | UniProt (O94705) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide VIIA |
| 20 | DA (j) | Cytochrome c oxidase subunit 12, mitochondrial | polymer | 86 | 10275.4 | 1 | UniProt (O94581) Pfam (PF02297) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide VIb |
| 21 | EA (k) | Cytochrome c oxidase subunit 13, mitochondrial | polymer | 130 | 15224.2 | 1 | UniProt (O74471) Pfam (PF02046) | Schizosaccharomyces pombe (fission yeast) | Cytochrome c oxidase polypeptide VIa |
| 22 | FA (l) | Respiratory supercomplex factor 2 homolog C1565.01 | polymer | 242 | 27085.0 | 1 | UniProt (Q9P3B2) Pfam (PF04588) | Schizosaccharomyces pombe (fission yeast) | |
| 23 | GA (m) | Unknown polypeptide | polymer | 26 | 2230.7 | 1 | Schizosaccharomyces pombe | ||
| 24 | HA, SB, VA (A, d, L) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 25 | GB, HB, IA, SA, TA... (S, A, H, L) | CARDIOLIPIN | non-polymer | 1464.0 | 6 | Chemie (CDL) | |||
| 26 | IB, JA, LA, XA (T, A, L) | 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE | non-polymer | 734.0 | 4 | Chemie (PCF) | |||
| 27 | BB, CB, EB, KA, NB... (N, O, A, a, b...) | DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE | non-polymer | 692.0 | 10 | Chemie (PEF) | |||
| 28 | MA, NA, YA, ZA (C, N) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 4 | Chemie (HEM) | |||
| 29 | AB, OA (N, C) | UBIQUINONE-10 | non-polymer | 863.3 | 2 | Chemie (U10) | |||
| 30 | DB, PA (O, D) | HEME C | non-polymer | 618.5 | 2 | Chemie (HEC) | |||
| 31 | FB, RA (P, E) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
| 32 | JB, KB (a) | HEME-A | non-polymer | 852.8 | 2 | Chemie (HEA) | |||
| 33 | LB (a) | COPPER (II) ION | non-polymer | 63.5 | 1 | Chemie (CU) | |||
| 34 | MB (a) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 35 | OB (b) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 36 | QB (b) | DINUCLEAR COPPER ION | non-polymer | 127.1 | 1 | Chemie (CUA) |
Sequence modifications
a: 1 - 538 (UniProt: P07657)
e: 1 - 186 (UniProt: O74988)
| PDB | External Database | Details |
|---|---|---|
| Tyr 400 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Glu 187 | - | expression tag |
| Asn 188 | - | expression tag |
| Leu 189 | - | expression tag |
| Tyr 190 | - | expression tag |
| Phe 191 | - | expression tag |
| Gln 192 | - | expression tag |
| Gly 193 | - | expression tag |
| Gly 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Gly 196 | - | expression tag |
| Gly 197 | - | expression tag |
| Gly 198 | - | expression tag |
| Ser 199 | - | expression tag |
| Ala 200 | - | expression tag |
| Trp 201 | - | expression tag |
| Ser 202 | - | expression tag |
| His 203 | - | expression tag |
| Pro 204 | - | expression tag |
| Gln 205 | - | expression tag |
| Phe 206 | - | expression tag |
| Glu 207 | - | expression tag |
| Lys 208 | - | expression tag |
| Gly 209 | - | expression tag |
| Gly 210 | - | expression tag |
| Gly 211 | - | expression tag |
| Ser 212 | - | expression tag |
| Gly 213 | - | expression tag |
| Gly 214 | - | expression tag |
| Gly 215 | - | expression tag |
| Ser 216 | - | expression tag |
| Gly 217 | - | expression tag |
| Gly 218 | - | expression tag |
| Ser 219 | - | expression tag |
| Ala 220 | - | expression tag |
| Trp 221 | - | expression tag |
| Ser 222 | - | expression tag |
| His 223 | - | expression tag |
| Pro 224 | - | expression tag |
| Gln 225 | - | expression tag |
| Phe 226 | - | expression tag |
| Glu 227 | - | expression tag |
| Lys 228 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 33 |
| Total formula weight | 786907.0 | |
| Non-Polymers* | Number of molecules | 39 |
| Total formula weight | 26578.2 | |
| All* | Total formula weight | 813485.2 |
