8PP7
human RYBP-PRC1 bound to mononucleosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (K, M) | Polycomb complex protein BMI-1 | polymer | 335 | 38152.4 | 2 | UniProt (P35226) Pfam (PF13923) Pfam (PF16207) | Homo sapiens (human) | Polycomb group RING finger protein 4,RING finger protein 51 |
| 2 | B, D (L, N) | E3 ubiquitin-protein ligase RING2 | polymer | 340 | 38062.7 | 2 | UniProt (Q99496) Pfam (PF13923) Pfam (PF16207) | Homo sapiens (human) | Huntingtin-interacting protein 2-interacting protein 3,HIP2-interacting protein 3,Protein DinG,RING finger protein 1B,RING1b,RING finger protein 2,RING finger protein BAP-1,RING-type E3 ubiquitin transferase RING2 |
| 3 | E, I (A, E) | Histone H3 (Fragment) | polymer | 135 | 15289.9 | 2 | UniProt (A0A7L0PXJ3) Pfam (PF00125) UniProt (by SIFTS) (P02299) | Drosophila melanogaster (fruit fly) | |
| 4 | F, J (B, F) | Histone H4 | polymer | 104 | 11521.6 | 2 | UniProt (A0A0B4KFZ9) Pfam (PF15511) UniProt (by SIFTS) (P84040) | Drosophila melanogaster (fruit fly) | |
| 5 | G, K (C, G) | Histone H2A | polymer | 123 | 13257.5 | 2 | UniProt (P84051) Pfam (PF00125) Pfam (PF16211) | Drosophila melanogaster (fruit fly) | |
| 6 | H, L (D, H) | Histone H2B | polymer | 123 | 13727.1 | 2 | UniProt (P02283) Pfam (PF00125) | Drosophila melanogaster (fruit fly) | |
| 7 | M (J) | DNA (215-mer) | polymer | 248 | 76716.8 | 1 | Homo sapiens | ||
| 8 | N (I) | DNA (215-mer) | polymer | 248 | 76481.6 | 1 | Homo sapiens | ||
| 9 | O, P, Q, R, S... (K, L, M, N) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) |
Sequence modifications
K, M: 1 - 326 (UniProt: P35226)
L, N: 1 - 336 (UniProt: Q99496)
B, F: -1 - 102 (UniProt: A0A0B4KFZ9)
| PDB | External Database | Details |
|---|---|---|
| Gly 327 | - | expression tag |
| Met 328 | - | expression tag |
| Lys 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| His 333 | - | expression tag |
| His 334 | - | expression tag |
| His 335 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Asp -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ile 0 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 413220.8 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 523.3 | |
| All* | Total formula weight | 413744.1 |
