8POR
Crystal structure of wolbachia leucyl-tRNA synthetase editing domain bound to cmpd6-AMP adduct
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Leucine--tRNA ligase | polymer | 179 | 20012.2 | 1 | UniProt (Q5GS31) Pfam (PF13603) | Wolbachia endosymbiont strain TRS of Brugia malayi | Leucyl-tRNA synthetase,LeuRS |
| 2 | B (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 3 | C (A) | [(1~{R},5~{S},6~{R},8~{R},9'~{S})-9'-(aminomethyl)-8-(6-aminopurin-9-yl)-2'-bromanyl-5'-[3-oxidanylidene-3-(1,3-thiazol-2-ylamino)propoxy]spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,7'-8-oxa-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-6-yl]methyl dihydrogen phosphate | non-polymer | 740.3 | 1 | Chemie (EYT) | |||
| 4 | D (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | E (A) | 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL | non-polymer | 354.4 | 1 | Chemie (PE4) | |||
| 6 | F (A) | water | water | 18.0 | 134 | Chemie (HOH) |
Sequence modifications
A: 219 - 394 (UniProt: Q5GS31)
| PDB | External Database | Details |
|---|---|---|
| Gly 216 | - | expression tag |
| Ala 217 | - | expression tag |
| Met 218 | - | expression tag |
| - | Ile 354 | deletion |
| - | Pro 355 | deletion |
| - | Ala 356 | deletion |
| - | Cys 357 | deletion |
| - | Asp 358 | deletion |
| - | Gln 359 | deletion |
| - | Gly 360 | deletion |
| - | Ser 361 | deletion |
| - | Tyr 362 | deletion |
| - | Thr 363 | deletion |
| - | Gly 364 | deletion |
| - | Ser 365 | deletion |
| - | Gln 366 | deletion |
| - | Cys 367 | deletion |
| - | Gln 368 | deletion |
| - | Ala 369 | deletion |
| - | Thr 370 | deletion |
| - | Arg 371 | deletion |
| - | Met 372 | deletion |
| - | Ala 373 | deletion |
| - | Asp 374 | deletion |
| - | Gly 375 | deletion |
| - | Leu 376 | deletion |
| - | Asn 377 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 20012.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1252.8 | |
| All* | Total formula weight | 21265.0 |
