8OXZ
Rat alpha5beta1 integrin, headpiece
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (P) | Integrin subunit alpha 5 | polymer | 1099 | 119567.7 | 1 | UniProt (A0A0G2K1E2) Pfam (PF01839) Pfam (PF08441) Pfam (PF20805) Pfam (PF20806) | Rattus norvegicus (Norway rat) | |
| 2 | B (Q) | Integrin beta-1 | polymer | 799 | 88594.6 | 1 | UniProt (P49134) Pfam (PF07974) Pfam (PF07965) Pfam (PF08725) Pfam (PF17205) Pfam (PF00362) Pfam (PF18372) Pfam (PF23105) | Rattus norvegicus (Norway rat) | Beta oligodendroglia,Beta OL,Fibronectin receptor subunit beta,VLA-4 subunit beta |
| 3 | C, D, E, F, G... (P, Q) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 8 | Chemie (NAG) |
Sequence modifications
P: 1 - 1099 (UniProt: A0A0G2K1E2)
Q: 1 - 799 (UniProt: P49134)
| PDB | External Database | Details |
|---|---|---|
| Ser 170 | - | insertion |
| Ile 172 | Leu 171 | conflict |
| Leu 173 | Lys 172 | conflict |
| Ser 175 | - | insertion |
| Ser 176 | - | insertion |
| Leu 177 | - | insertion |
| Tyr 178 | Phe 174 | conflict |
| Ser 179 | Lys 175 | conflict |
| Glu 181 | Gly 177 | conflict |
| Val 183 | - | insertion |
| Glu 184 | - | insertion |
| Tyr 185 | - | insertion |
| Lys 186 | Ser 179 | conflict |
| Ser 187 | Ile 180 | conflict |
| Leu 188 | Ser 181 | conflict |
| Gln 189 | Gly 182 | conflict |
| Phe 191 | Val 184 | conflict |
| Ala 193 | Leu 186 | conflict |
| Thr 194 | Gln 187 | conflict |
| - | Phe 188 | deletion |
| - | Gly 189 | deletion |
| His 198 | Trp 193 | conflict |
| Ser 201 | Cys 196 | conflict |
| Ile 202 | Cys 197 | conflict |
| Leu 203 | Glu 198 | conflict |
| - | Gly 199 | deletion |
| - | Cys 200 | deletion |
| - | Ser 201 | deletion |
| - | Pro 202 | deletion |
| Tyr 323 | Arg 322 | conflict |
| Ser 324 | Gln 323 | conflict |
| Val 325 | Ala 324 | conflict |
| Ala 326 | Gly 325 | conflict |
| Val 327 | Arg 326 | conflict |
| Gly 328 | Glu 327 | conflict |
| Glu 329 | Arg 328 | conflict |
| Phe 330 | Met 329 | conflict |
| Ser 331 | Gly 330 | conflict |
| Asp 333 | Glu 332 | conflict |
| Asp 334 | - | insertion |
| Thr 335 | - | insertion |
| Glu 336 | - | insertion |
| Asp 337 | - | insertion |
| Phe 338 | - | insertion |
| Val 339 | - | insertion |
| Ala 340 | - | insertion |
| Gly 341 | - | insertion |
| Val 342 | - | insertion |
| Pro 343 | - | insertion |
| Lys 344 | Ile 333 | conflict |
| Asn 346 | Gly 335 | conflict |
| Thr 348 | Tyr 337 | conflict |
| Tyr 349 | Pro 338 | conflict |
| Gly 350 | His 339 | conflict |
| Tyr 351 | Ser 340 | conflict |
| Val 569 | Gly 558 | conflict |
| Ser 570 | Gly 559 | conflict |
| - | Val 561 | deletion |
| - | Cys 562 | deletion |
| - | Leu 563 | deletion |
| - | Arg 564 | deletion |
| - | Lys 565 | deletion |
| - | Gly 566 | deletion |
| - | Gln 567 | deletion |
| - | Ala 568 | deletion |
| - | Gly 569 | deletion |
| - | Ile 570 | deletion |
| PDB | External Database | Details |
|---|---|---|
| Ala 319 | Ile 319 | conflict |
| Ile 320 | Ala 320 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 208162.3 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1769.7 | |
| All* | Total formula weight | 209931.9 |
