8OXD
Structure of the human LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain bound with decasaccharide hyaluronan.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lymphatic vessel endothelial hyaluronic acid receptor 1 | polymer | 146 | 16102.7 | 1 | UniProt (Q9Y5Y7) Pfam (PF00193) | Homo sapiens (human) | LYVE-1,Cell surface retention sequence-binding protein 1,CRSBP-1,Extracellular link domain-containing protein 1,Hyaluronic acid receptor |
| 2 | B (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid | branched | 1156.0 | 1 | In PDB GlyTouCan (G97733LD) | |||
| 3 | C, D, E (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 4 | F (A) | water | water | 18.0 | 91 | Chemie (HOH) |
Sequence modifications
A: 1 - 144 (UniProt: Q9Y5Y7)
| PDB | External Database | Details |
|---|---|---|
| His 145 | - | expression tag |
| His 146 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 16102.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 1156.0 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 17922.3 |
